RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 PSG11Q9UQ72 335 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 PPP1R3CQ9UQK1 317 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 WASHC3Q9Y3C0 194 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 IGHV2-26A0A0B4J1V2 119 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 IGLC7A0M8Q6 106 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 OTOL1A6NHN0 477 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-213ENST00000636759 RAMP3O60896 148 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 RBMXL2O75526 392 aaKnown RBP5.95□□□□□ -1.46
SCN1A-213ENST00000636759 KBTBD11O94819 623 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 ADH5P11766 374 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 ZNF16P17020 682 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-213ENST00000636759 OTX1P32242 354 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-213ENST00000636759 CKS1BP61024 79 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 RPL23P62829 140 aaKnown RBP5.95□□□□□ -1.46
SCN1A-213ENST00000636759 EXT1Q16394 746 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 SPIN3Q5JUX0 258 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 CPEB2Q7Z5Q1 589 aaKnown RBP5.95□□□□□ -1.46
SCN1A-213ENST00000636759 MRGPRGQ86SM5 289 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 CDC20BQ86Y33 519 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 ASB5Q8WWX0 329 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 PLEKHF2Q9H8W4 249 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 CHODLQ9H9P2 273 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 TAC3Q9UHF0 121 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 PXMP4Q9Y6I8 212 aa5.95□□□□□ -1.46
SCN1A-213ENST00000636759 A0A0A6YYD5 115 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 FEZF1A0PJY2 475 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 OR2T8A6NH00 312 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 METTL12A8MUP2 240 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 ZNF732B4DXR9 585 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 TNFSF12O43508 249 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 TIAF1O95411 115 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 RENP00797 406 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 CTSEP14091 401 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 ZNF93P35789 620 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-213ENST00000636759 CTRLP40313 264 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 GUCA1AP43080 201 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-213ENST00000636759 SNU13P55769 128 aaKnown RBP5.94□□□□□ -1.46
SCN1A-213ENST00000636759 PLAURQ03405 335 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 C1orf100Q5SVJ3 147 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 BHLHA15Q7RTS1 189 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-213ENST00000636759 OR2I1PQ8NGU4 316 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 CNRIP1Q96F85 164 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-213ENST00000636759 SIGMAR1Q99720 223 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 FBXO34Q9NWN3 711 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 OR51B2Q9Y5P1 312 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 CPAMD8Q8IZJ3 1885 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 G3V3Y1 287 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 G3V4G9 280 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 MSTNO14793 375 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 FSTP19883 344 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 AADACP22760 399 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 ANOS1P23352 680 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 GRK6P43250 576 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 CEBPDP49716 269 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-213ENST00000636759 CSNK1G2P78368 415 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 C17orf67Q0P5P2 114 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 RAB31Q13636 194 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 STUMQ69YW2 141 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 MFSD12Q6NUT3 480 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 KCTD18Q6PI47 426 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-213ENST00000636759 ZNF765Q7L2R6 523 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 SCGB1C1Q8TD33 95 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 BORCS7Q96B45 105 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 GTSF1LQ9H1H1 148 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 OBP2AQ9NY56 170 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 PEF1Q9UBV8 284 aaKnown RBP5.94□□□□□ -1.46
SCN1A-213ENST00000636759 ARID1BQ8NFD5 2236 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-213ENST00000636759 TRAV1-1A0A0B4J248 108 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 CENPVL1A0A0U1RR11 272 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 DPRXA6NFQ7 191 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 CST7O76096 145 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 PMCHP20382 165 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 CCNOP22674 350 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 ADMP35318 185 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 CEACAM3P40198 252 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 FOXL2P58012 376 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 DPTQ07507 201 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 COL9A2Q14055 689 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-213ENST00000636759 SP6Q3SY56 376 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 PRAMEF5Q5TYX0 476 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 PRAMEF6Q5VXH4 476 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 C20orf196Q8IYI0 205 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 OR8I2Q8N0Y5 310 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 SLC22A24Q8N4F4 322 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 COX14Q96I36 57 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 GUCD1Q96NT3 240 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 SDF2Q99470 211 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 RSG1Q9BU20 258 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 WNT10AQ9GZT5 417 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 MBNL1Q9NR56 388 aaKnown RBP5.94□□□□□ -1.46
SCN1A-213ENST00000636759 FBXL7Q9UJT9 491 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 CES1P1Q9UKY3 287 aa5.94□□□□□ -1.46
SCN1A-213ENST00000636759 HIST1H1DP16402 221 aaKnown RBP5.93□□□□□ -1.46
SCN1A-213ENST00000636759 AZU1P20160 251 aa5.93□□□□□ -1.46
SCN1A-213ENST00000636759 CDKN2AP42771 156 aaKnown RBP5.93□□□□□ -1.46
SCN1A-213ENST00000636759 CTXN1P60606 82 aa5.93□□□□□ -1.46
SCN1A-213ENST00000636759 FHL1Q13642 323 aa5.93□□□□□ -1.46
SCN1A-213ENST00000636759 TESK1Q15569 626 aa5.93□□□□□ -1.46
SCN1A-213ENST00000636759 TMEM52BQ4KMG9 183 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms