RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 C1RLQ9NZP8 487 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 PRR19A6NJB7 356 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 C9JCJ5 164 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 PLPP3O14495 311 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 MPV17LQ2QL34 196 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 TBX21Q9UL17 535 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 CDRT15L2A8MXV6 281 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 HIST1H1EP10412 219 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 TRA2AQ13595 282 aaKnown RBP eCLIP15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 GBGT1Q8N5D6 347 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 NUP205Q92621 2012 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 MFSD2BA6NFX1 497 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 MPDU1O75352 247 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 OTX1P32242 354 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 GP2P55259 537 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 ZNF273Q14593 569 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 PRICKLE4Q2TBC4 344 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 UNQ9370/PRO34162Q6UXP9 181 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 OR4C13Q8NGP0 309 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 CHST1O43916 411 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 B4GALNT1Q00973 533 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 RAB32Q13637 225 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 RAXQ9Y2V3 346 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 LILRA5A6NI73 299 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 FAM162BQ5T6X4 162 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 KLHDC1Q8N7A1 406 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 PDFQ9HBH1 243 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 SCN11AQ9UI33 1791 aa15.68■□□□□ 0.1
CACNA1A-227ENST00000636549 RGS13O14921 159 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 TFAP2AP05549 437 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 A0A1B0GTL3 188 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 IGHV4-34P06331 123 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 TTTY12Q9BZ98 90 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 GPR35Q9HC97 309 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 PPIAL4EA0A075B759 164 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 PPIAL4DF5H284 164 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 PPIAL4FP0DN26 164 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 TMEM241Q24JQ0 296 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 NHLRC1Q6VVB1 395 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 MS4A3Q96HJ5 214 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 MED30Q96HR3 178 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 PPIAL4AQ9Y536 164 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 RAF1P04049 648 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 GUK1Q16774 197 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 WDFY1Q8IWB7 410 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 WFDC12Q8WWY7 111 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 MRGPRFQ96AM1 343 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 BTAF1O14981 1849 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 GPX2P18283 190 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 ZNF56Q15929 161 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 ZG16BQ96DA0 208 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 HDHD3Q9BSH5 251 aaPredicted RBP15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 TLNRD1Q9H1K6 362 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 RASL12Q9NYN1 266 aa15.67■□□□□ 0.1
CACNA1A-227ENST00000636549 IGHV3OR16-8A0A075B7F1 116 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 LOC107984156A0A0G2JMH3 177 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 RAB29O14966 203 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 DEDDO75618 318 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 SUCLG1P53597 346 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 RPL31P62899 125 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 ATP6V1FQ16864 119 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 ASCL5Q7RTU5 278 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 ARL17AQ8IVW1 177 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 FGF11Q92914 225 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 RNF24Q9Y225 148 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 RPS4Y1P22090 263 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 CDKN2AP42771 156 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 GAPTQ8N292 157 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 FAM24BQ8N5W8 94 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 FOXJ3Q9UPW0 622 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 PPP1R1AQ13522 171 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 RASL10BQ96S79 203 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 TMED3Q9Y3Q3 217 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 FCGR3AP08637 254 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 LIFP15018 202 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 HIST1H1DP16402 221 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 MEOX2P50222 304 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 ABHD14BQ96IU4 210 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 PRRX2Q99811 253 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 CCL28Q9NRJ3 127 aa15.66■□□□□ 0.1
CACNA1A-227ENST00000636549 Q6ZNB5 142 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 GATA6Q92908 595 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 ELOVL1Q9BW60 279 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 C3orf36Q3SXR2 165 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 TMEM229BQ8NBD8 167 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 NUDT10Q8NFP7 164 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 ASB10Q8WXI3 467 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 NUDT11Q96G61 164 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 FCGR2BP31994 310 aaPredicted RBP15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 MDH2P40926 338 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 HIST3H3Q16695 136 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 SLC25A19Q9HC21 320 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 ZAR1LA6NP61 321 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 PSG2P11465 335 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 SIGLEC14Q08ET2 396 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 UBE2DNLQ8IWF7 75 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 MDKP21741 143 aaPredicted RBP15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 GABRA6Q16445 453 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 LIAT1Q6ZQX7 453 aa15.65■□□□□ 0.1
CACNA1A-227ENST00000636549 ZNF826PQ6ZT77 177 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms