RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 SPRED3Q2MJR0 410 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 FLYWCH2Q96CP2 140 aaKnown RBP11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 OR5AC1P0C628 307 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 TWIST1Q15672 202 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 WDR74Q6RFH5 385 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 STARD4Q96DR4 205 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 FOXB1Q99853 325 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 SIRT5Q9NXA8 310 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 COL24A1Q17RW2 1714 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 SRSF10O75494 262 aaKnown RBP11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 PCBP3P57721 371 aaKnown RBP11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 MAMSTRQ6ZN01 415 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 ZNF707Q96C28 371 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 HTN1P15515 57 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 TIAL1Q01085 375 aaKnown RBP eCLIP11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 PAQR6Q6TCH4 344 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 IL22RA2Q969J5 263 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 MED12LQ86YW9 2145 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 C9orf170A2RU37 121 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 ADAT3Q96EY9 351 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 ERRFI1Q9UJM3 462 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 MPC2O95563 127 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 C12orf54Q6X4T0 127 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 R3HDM4Q96D70 268 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 SCMH1Q96GD3 660 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 GHITMQ9H3K2 345 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 TNFSF14O43557 240 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 ST6GAL1P15907 406 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 COX7A1P24310 79 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 HLA-DRB3P79483 266 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 GPBAR1Q8TDU6 330 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 LINC01565O15544 149 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 P2RY1P47900 373 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 CDX1P47902 265 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 RSRP1Q9BUV0 290 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 ASCL3Q9NQ33 180 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 PITPNC1Q9UKF7 332 aa11.7□□□□□ -0.54
SYNGAP1-208ENST00000629380 UPK1AO00322 258 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 CSN3P07498 182 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 DYNLT3P51808 116 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 CTF1Q16619 201 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 OR4D9Q8NGE8 314 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 ZNF831Q5JPB2 1677 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 SPINK4O60575 86 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 TTRP02766 147 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 FOXO1Q12778 655 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 Q8WTZ3 238 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 TBX15Q96SF7 602 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 SLC25A35Q3KQZ1 300 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 TM4SF20Q53R12 229 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 FAM90A27PA6NNH2 459 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 ZNF519Q8TB69 540 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 RNF167Q9H6Y7 350 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 ING1Q9UK53 422 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 HIGD1AQ9Y241 93 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 TMPRSS2O15393 492 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 CTAG2O75638 210 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 SSPNQ14714 243 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 DTD1Q8TEA8 209 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 C4orf45Q96LM5 186 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 GPR61Q9BZJ8 451 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 PPP1R1AQ13522 171 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 FBXL6Q8N531 539 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 NUP37Q8NFH4 326 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 OR2W1Q9Y3N9 320 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 H0Y8X5 98 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 CDAP32320 146 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 MTFP1Q9UDX5 166 aa11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 EXOGQ9Y2C4 368 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-208ENST00000629380 SFT2D2O95562 160 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 ACAA1P09110 424 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 SPEM2Q0P670 501 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 TTC32Q5I0X7 151 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 Q6ZNB5 142 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 MBNL1Q9NR56 388 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 TANC2Q9HCD6 1990 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 FAM3BP58499 235 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 SPANXN1Q5VSR9 72 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 EBLN2Q6P2I7 272 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 MUC20Q8N307 709 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 NUDT8Q8WV74 236 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 PLSCR3Q9NRY6 295 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 HOXC4P09017 264 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 OR10J1P30954 320 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 WNT3P56703 355 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 SLC35B1P78383 322 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 C11orf91Q3C1V1 193 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 MPC1Q9Y5U8 109 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 IGLV3-27P01718 113 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 NAT2P11245 290 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 VN1R1Q9GZP7 353 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 MMP25Q9NPA2 562 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 ZNF774Q6NX45 483 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 P2RX4Q99571 388 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 WNT9BO14905 357 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 TSPAN13O95857 204 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 RAXQ9Y2V3 346 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 MED13Q9UHV7 2174 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 B4GALT3O60512 393 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 TRIP6Q15654 476 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms