RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 TMEM72A0PK05 275 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 OR4C46A6NHA9 309 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 TRIM49D1C9J1S8 452 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 GFYI3L273 518 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 J3KT08 172 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 MFNGO00587 321 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 FABP7O15540 132 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 EFNA2O43921 213 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 MFSD11O43934 449 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF354AO60765 605 aaPredicted RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 C1orf105O95561 183 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 SEMA4FO95754 770 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 CLIC3O95833 236 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 FABP3P05413 133 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 HPNP05981 417 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 CRYGDP07320 174 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 TACSTD2P09758 323 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 OR5H8P0DN80 308 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 CYBAP13498 195 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 CD1DP15813 335 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 SDC1P18827 310 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 PSMB1P20618 241 aaKnown RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 GPX3P22352 226 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ZBTB25P24278 435 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 IL12AP29459 219 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 CMPK1P30085 196 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 RPL4P36578 427 aaKnown RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 EMDP50402 254 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 HCCSP53701 268 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 SELENOWP63302 87 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 CDK6Q00534 326 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 FMODQ06828 376 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 INCA1Q0VD86 236 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ST3GAL4Q11206 333 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 UNC119Q13432 240 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 OR5I1Q13606 314 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 FAM53BQ14153 422 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 GINS1Q14691 196 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 MEF2DQ14814 521 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 EBPQ15125 230 aaKnown RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 OR1C1Q15619 314 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 OR8B8Q15620 311 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 C4orf26Q17RF5 130 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ECSCRQ19T08 205 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 PRR30Q53SZ7 412 aaPredicted RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 LDLRAD2Q5SZI1 272 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 DCST2Q5T1A1 773 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 C1orf194Q5T5A4 169 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 FAM162BQ5T6X4 162 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 TEX36Q5VZQ5 186 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 TMEM215Q68D42 235 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 TNFAIP8L2Q6P589 184 aaPredicted RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ARL9Q6T311 187 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 REG3GQ6UW15 175 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 UGT2A3Q6UWM9 527 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 WDR82Q6UXN9 313 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ADAMTSL5Q6ZMM2 481 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 STRADAQ7RTN6 431 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 OAFQ86UD1 273 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 VKORC1L1Q8N0U8 176 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ZADH2Q8N4Q0 377 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 GVQW1Q8N7I0 195 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 GATD1Q8NB37 220 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 OR1S2Q8NGQ3 325 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 TYMSOSQ8TAI1 123 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF420Q8TAQ5 688 aaPredicted RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 CRYGNQ8WXF5 182 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 HIST1H2BAQ96A08 127 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 TMEM159Q96B96 161 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 FGGYQ96C11 551 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ISOC1Q96CN7 298 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 DNAJC19Q96DA6 116 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 AURKBQ96GD4 344 aaPredicted RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 DCUN1D1Q96GG9 259 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 PAGE5Q96GU1 130 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 CNBD2Q96M20 576 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 GPR82Q96P67 336 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 SCGB3A2Q96PL1 93 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 GABRG3Q99928 467 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 RASL11BQ9BPW5 248 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 HSPB9Q9BQS6 159 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 LXNQ9BS40 222 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 PSMG3Q9BT73 122 aaPredicted RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 DOHHQ9BU89 302 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 HES7Q9BYE0 225 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 LPAR5Q9H1C0 372 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF442Q9H7R0 627 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 TAF9BQ9HBM6 251 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 KCNJ16Q9NPI9 418 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 UBQLN4Q9NRR5 601 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 MRPL16Q9NX20 251 aaKnown RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 MED29Q9NX70 200 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 SCN3BQ9NY72 215 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 TECRQ9NZ01 308 aaKnown RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 COMMD9Q9P000 198 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF319Q9P2F9 582 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ERG28Q9UKR5 140 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 CARHSP1Q9Y2V2 147 aaKnown RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 A0A1W2PP64 1363 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 METP08581 1390 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms