RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 AKAP14Q86UN6 197 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 DTX2Q86UW9 622 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 LHFPL1Q86WI0 220 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 ZNF561Q8N587 486 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 CD177Q8N6Q3 437 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 ASCC1Q8N9N2 400 aaKnown RBP6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 OR5D13Q8NGL4 314 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 OR4A4PQ8NGN8 299 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 OR13C8Q8NGS7 320 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 ANGPTL6Q8NI99 470 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 PLPPR1Q8TBJ4 325 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 DACT3Q96B18 629 aaPredicted RBP6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 RAB1BQ9H0U4 201 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 DNTTIP1Q9H147 329 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 OR51J1Q9H342 316 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 GHITMQ9H3K2 345 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 MBNL3Q9NUK0 354 aaKnown RBP6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 TMEM106BQ9NUM4 274 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 KCNIP1Q9NZI2 227 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 ZNF222Q9UK12 451 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 TRAPPC2LQ9UL33 140 aa6.32□□□□□ -1.4
PTP4A1-206ENST00000627002 CFAP46Q8IYW2 2715 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 PPIAL4EA0A075B759 164 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 IGHV3OR15-7A0A075B7D8 119 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 CLEC18AA5D8T8 446 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 PPIAL4DF5H284 164 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 K7N7A8 449 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 MGST3O14880 152 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 ZNF737O75373 536 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 FSTL3O95633 263 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 TK1P04183 234 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 PPIAL4FP0DN26 164 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 PGAM2P15259 253 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 ANXA7P20073 488 aaKnown RBP6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 UBE2MP61081 183 aaKnown RBP6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 SEC61A1P61619 476 aaKnown RBP6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 RRAS2P62070 204 aaPredicted RBP6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 CBX3Q13185 183 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 CARTPTQ16568 116 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 HFEQ30201 348 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 KRBOX4Q5JUW0 171 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 C6orf183Q5T699 404 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 ATPAF1Q5TC12 328 aaPredicted RBP6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 CD276Q5ZPR3 534 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 C11orf71Q6IPW1 123 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 FAHD2BQ6P2I3 314 aaPredicted RBP6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 CLEC18BQ6UXF7 455 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 C20orf204Q6ZNR8 217 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 Q6ZPA2 131 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 C17orf107Q6ZR85 190 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 SLC36A1Q7Z2H8 476 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 TMED4Q7Z7H5 227 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 ZNF554Q86TJ5 538 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 SLC25A42Q86VD7 318 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 ZCCHC24Q8N2G6 241 aaKnown RBP6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 CLEC18CQ8NCF0 446 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 OR5T2Q8NGG2 359 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 ZFAND1Q8TCF1 268 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 MARCH1Q8TCQ1 289 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 NEU4Q8WWR8 484 aaPredicted RBP6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 CCL17Q92583 94 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 SDSLQ96GA7 329 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 FAHD2AQ96GK7 314 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 VRK1Q99986 396 aaPredicted RBP6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 SPOCK3Q9BQ16 436 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 NEURL2Q9BR09 285 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 ZNF2Q9BSG1 426 aaPredicted RBP6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 CABLES2Q9BTV7 478 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 FAM234AQ9H0X4 552 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 MED28Q9H204 178 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 NCOR1P1Q9H4R4 102 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 ZNF665Q9H7R5 613 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 SLC23A1Q9UHI7 598 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 PCDHB10Q9UN67 800 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 GPR132Q9UNW8 380 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 C14orf166Q9Y224 244 aaKnown RBP6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 VSIG4Q9Y279 399 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 PPIAL4AQ9Y536 164 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 RTTNQ86VV8 2226 aa6.31□□□□□ -1.4
PTP4A1-206ENST00000627002 MEIKINA0A087WXM9 373 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 NPIPB11E5RHQ5 1161 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 BET1O15155 118 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 SIGLEC5O15389 551 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 NDUFA2O43678 99 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 SSNA1O43805 119 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 CCNKO75909 580 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 GYPAP02724 150 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 HPXP02790 462 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 SCTP09683 121 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 OR4E1P0C645 316 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 DANCRP0C864 163 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 RCC1P18754 421 aaPredicted RBP6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 ERP29P30040 261 aaKnown RBP6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 FCGR2CP31995 323 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 NPY4RP50391 375 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 UCP3P55916 312 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 HERV-K104P61576 105 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 IL13RA1P78552 427 aa6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 MRPS11P82912 194 aaKnown RBP6.3□□□□□ -1.4
PTP4A1-206ENST00000627002 HOXA4Q00056 320 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms