RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 HES3Q5TGS1 186 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 CRYBG3Q68DQ2 2970 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 TMEM220Q6QAJ8 160 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 METAP1DQ6UB28 335 aaPredicted RBP1.23□□□□□ -2.21
VBP1-204ENST00000625964 SSX9Q7RTT3 188 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 Q8NDZ9 215 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 OR8K3Q8NH51 312 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 OR1S1Q8NH92 325 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 RDH12Q96NR8 316 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 SCGB3A2Q96PL1 93 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 SND1-IT1Q9HBX3 110 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 TREX1Q9NSU2 369 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 C20orf96Q9NUD7 363 aaPredicted RBP1.23□□□□□ -2.21
VBP1-204ENST00000625964 NMRK1Q9NWW6 199 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 NAV1Q8NEY1 1877 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 FLNAP21333 2647 aaKnown RBP1.23□□□□□ -2.21
VBP1-204ENST00000625964 CELSR1Q9NYQ6 3014 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 THADAQ6YHU6 1953 aa1.23□□□□□ -2.21
VBP1-204ENST00000625964 MUC22E2RYF6 1773 aaPredicted RBP1.23□□□□□ -2.21
VBP1-204ENST00000625964 PLIN4Q96Q06 1357 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 BOD1L1Q8NFC6 3051 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 KCNE1BA0A087WTH5 132 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 IGHV6-1A0A0B4J1U7 121 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 A0A0G2JMP0 313 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 A0A0X1KG70 313 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 ARL5CA6NH57 179 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 GOLGA8JA6NMD2 632 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 MYL12BO14950 172 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 SYNGR2O43760 224 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 LDOC1O95751 146 aaPredicted RBP1.22□□□□□ -2.21
VBP1-204ENST00000625964 GOLGA8HP0CJ92 632 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 GRB2P62993 217 aaKnown RBP1.22□□□□□ -2.21
VBP1-204ENST00000625964 ADIGQ0VDE8 80 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 DNAJC3Q13217 504 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 TPBGQ13641 420 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 KRTAP25-1Q3LHN0 102 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 STEAP4Q687X5 459 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 RNF10Q8N5U6 811 aaKnown RBP1.22□□□□□ -2.21
VBP1-204ENST00000625964 WDR31Q8NA23 367 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 ZFP62Q8NB50 900 aaPredicted RBP1.22□□□□□ -2.21
VBP1-204ENST00000625964 RCN3Q96D15 328 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 FAM19A4Q96LR4 140 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 DERL3Q96Q80 235 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 PEBP4Q96S96 227 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 ASCL3Q9NQ33 180 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 FBXO8Q9NRD0 319 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 MYEF2Q9P2K5 600 aaKnown RBP1.22□□□□□ -2.21
VBP1-204ENST00000625964 ESPL1Q14674 2120 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 NBEAL2Q6ZNJ1 2754 aa1.22□□□□□ -2.21
VBP1-204ENST00000625964 EML5Q05BV3 1969 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 PCDH15Q96QU1 1955 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 A0A075B6Q4 140 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 K7EQS6 105 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 CACNG3O60359 315 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 FARS2O95363 451 aaKnown RBP1.21□□□□□ -2.22
VBP1-204ENST00000625964 IGHMP01871 453 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 KRT7P08729 469 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 PRPS1L1P21108 318 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 FUSP35637 526 aaKnown RBP eCLIP1.21□□□□□ -2.22
VBP1-204ENST00000625964 PDGFRLQ15198 375 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 RCN1Q15293 331 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 GABRA6Q16445 453 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 TMEM53Q6P2H8 277 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 TRMT10CQ7L0Y3 403 aaKnown RBP1.21□□□□□ -2.22
VBP1-204ENST00000625964 ITLN2Q8WWU7 325 aaPredicted RBP1.21□□□□□ -2.22
VBP1-204ENST00000625964 MRPL48Q96GC5 212 aaKnown RBP1.21□□□□□ -2.22
VBP1-204ENST00000625964 API5Q9BZZ5 524 aaKnown RBP1.21□□□□□ -2.22
VBP1-204ENST00000625964 FANCEQ9HB96 536 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 TMEM100Q9NV29 134 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 ENPP4Q9Y6X5 453 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 BSNQ9UPA5 3926 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 BAZ2AQ9UIF9 1905 aaKnown RBP1.21□□□□□ -2.22
VBP1-204ENST00000625964 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.21□□□□□ -2.223e-6■■■□□ 18.6
VBP1-204ENST00000625964 COL4A2P08572 1712 aa1.21□□□□□ -2.22
VBP1-204ENST00000625964 ABCA4P78363 2273 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 A0A1B0GTQ1 180 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 ZBTB5O15062 677 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 XRCC2O43543 280 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 MPDU1O75352 247 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 CBR1P16152 277 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 ITIH4Q14624 930 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 LGALSLQ3ZCW2 172 aaPredicted RBP1.2□□□□□ -2.22
VBP1-204ENST00000625964 MRPL2Q5T653 305 aaKnown RBP1.2□□□□□ -2.22
VBP1-204ENST00000625964 PQLC3Q8N755 202 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 PDCD6IPQ8WUM4 868 aaKnown RBP1.2□□□□□ -2.22
VBP1-204ENST00000625964 ISG20Q96AZ6 181 aaKnown RBP1.2□□□□□ -2.22
VBP1-204ENST00000625964 JSRP1Q96MG2 331 aaPredicted RBP1.2□□□□□ -2.22
VBP1-204ENST00000625964 NAPGQ99747 312 aaPredicted RBP1.2□□□□□ -2.22
VBP1-204ENST00000625964 BOLA2Q9H3K6 86 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 REEP1Q9H902 201 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 FAM60AQ9NP50 221 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 PPIL1Q9Y3C6 166 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 HELZP42694 1942 aaKnown RBP1.2□□□□□ -2.22
VBP1-204ENST00000625964 MYO5AQ9Y4I1 1855 aaKnown RBP1.2□□□□□ -2.22
VBP1-204ENST00000625964 PKDREJQ9NTG1 2253 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 TACC2O95359 2948 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 VWA8A3KMH1 1905 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 LINC01619G3V211 115 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 H3BQ85 93 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 RNF113AO15541 343 aaKnown RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms