RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 PLSCR2Q9NRY7 297 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 AK3Q9UIJ7 227 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 A0A087WWC5 75 aa15.13■□□□□ 0.01
PCF11-207ENST00000624931 PIGBOS1A0A0B4J2F0 54 aa15.13■□□□□ 0.01
PCF11-207ENST00000624931 E9PLN8 166 aa15.13■□□□□ 0.01
PCF11-207ENST00000624931 WRBO00258 174 aa15.13■□□□□ 0.01
PCF11-207ENST00000624931 MMP9P14780 707 aa15.13■□□□□ 0.01
PCF11-207ENST00000624931 RBMS3Q6XE24 437 aaKnown RBP15.13■□□□□ 0.01
PCF11-207ENST00000624931 ETV3LQ6ZN32 361 aa15.13■□□□□ 0.01
PCF11-207ENST00000624931 CD300LFQ8TDQ1 290 aa15.13■□□□□ 0.01
PCF11-207ENST00000624931 HPSE2Q8WWQ2 592 aa15.13■□□□□ 0.01
PCF11-207ENST00000624931 PIGTQ969N2 578 aa15.13■□□□□ 0.01
PCF11-207ENST00000624931 MSI2Q96DH6 328 aaKnown RBP15.13■□□□□ 0.01
PCF11-207ENST00000624931 RSRP1Q9BUV0 290 aa15.13■□□□□ 0.01
PCF11-207ENST00000624931 RBM24Q9BX46 236 aaKnown RBP15.13■□□□□ 0.01
PCF11-207ENST00000624931 NOSIPQ9Y314 301 aaKnown RBP15.13■□□□□ 0.01
PCF11-207ENST00000624931 SLC22A20A6NK97 555 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 TMEM211Q6ICI0 200 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 NUFIP2Q7Z417 695 aaKnown RBP15.12■□□□□ 0.01
PCF11-207ENST00000624931 Q8NA96 180 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 OR4D5Q8NGN0 318 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 NABP1Q96AH0 204 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 TMEM45BQ96B21 275 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 TECTBQ96PL2 329 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 FAAP24Q9BTP7 215 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 HIPK2Q9H2X6 1198 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 SLC2A9Q9NRM0 540 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 SPENQ96T58 3664 aaKnown RBP15.12■□□□□ 0.01
PCF11-207ENST00000624931 DUXBA0A1W2PPF3 345 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 CXorf65A6NEN9 183 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 PITX3O75364 302 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 OR2C1O95371 312 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 OR8U8P0C7N1 319 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 AKR1C3P42330 323 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 RAB2AP61019 212 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 HERV-K104P61576 105 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 HIKESHIQ53FT3 197 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 TSPO2Q5TGU0 170 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 FAM27BQ5VT28 67 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 DPPA3Q6W0C5 159 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 LYZL2Q7Z4W2 148 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 FAM24BQ8N5W8 94 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 TOMM40LQ969M1 308 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 TRIB1Q96RU8 372 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 CRLF2Q9HC73 371 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 CLCF1Q9UBD9 225 aa15.12■□□□□ 0.01
PCF11-207ENST00000624931 RCL1Q9Y2P8 373 aaKnown RBP15.12■□□□□ 0.01
PCF11-207ENST00000624931 RBP2P50120 134 aa15.11■□□□□ 0.01
PCF11-207ENST00000624931 MRPS34P82930 218 aaKnown RBP15.11■□□□□ 0.01
PCF11-207ENST00000624931 RAB35Q15286 201 aa15.11■□□□□ 0.01
PCF11-207ENST00000624931 SRSF7Q16629 238 aaKnown RBP eCLIP15.11■□□□□ 0.01
PCF11-207ENST00000624931 ADAM5Q6NVV9 412 aa15.11■□□□□ 0.01
PCF11-207ENST00000624931 HEPN1Q6WQI6 88 aa15.11■□□□□ 0.01
PCF11-207ENST00000624931 MCEMP1Q8IX19 187 aa15.11■□□□□ 0.01
PCF11-207ENST00000624931 ZNF100Q8IYN0 542 aa15.11■□□□□ 0.01
PCF11-207ENST00000624931 GPR137CQ8N3F9 429 aa15.11■□□□□ 0.01
PCF11-207ENST00000624931 SGK3Q96BR1 496 aa15.11■□□□□ 0.01
PCF11-207ENST00000624931 GNPNAT1Q96EK6 184 aaPredicted RBP15.11■□□□□ 0.01
PCF11-207ENST00000624931 PLEKHF2Q9H8W4 249 aa15.11■□□□□ 0.01
PCF11-207ENST00000624931 SIRT7Q9NRC8 400 aa15.11■□□□□ 0.01
PCF11-207ENST00000624931 PLEK2Q9NYT0 353 aa15.11■□□□□ 0.01
PCF11-207ENST00000624931 MIOXQ9UGB7 285 aa15.11■□□□□ 0.01
PCF11-207ENST00000624931 BOD1L1Q8NFC6 3051 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 FAM230AA0A1W2PPH8 454 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 MRPL33O75394 65 aaKnown RBP15.1■□□□□ 0.01
PCF11-207ENST00000624931 CBR1P16152 277 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 FOXG1P55316 489 aaPredicted RBP15.1■□□□□ 0.01
PCF11-207ENST00000624931 EWSR1Q01844 656 aaKnown RBP eCLIP15.1■□□□□ 0.01
PCF11-207ENST00000624931 RSPO1Q2MKA7 263 aaPredicted RBP15.1■□□□□ 0.01
PCF11-207ENST00000624931 PRR30Q53SZ7 412 aaPredicted RBP15.1■□□□□ 0.01
PCF11-207ENST00000624931 OR2C3Q8N628 320 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 ISOC2Q96AB3 205 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 SARAFQ96BY9 339 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 BORCS8Q96FH0 119 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 BOD1Q96IK1 185 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 YPEL4Q96NS1 127 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 HDHD3Q9BSH5 251 aaPredicted RBP15.1■□□□□ 0.01
PCF11-207ENST00000624931 C12orf49Q9H741 205 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 GPR35Q9HC97 309 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 GPR173Q9NS66 373 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 KIAA1456Q9P272 454 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 SVILO95425 2214 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 PIEZO2Q9H5I5 2752 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 FREM1Q5H8C1 2179 aa15.1■□□□□ 0.01
PCF11-207ENST00000624931 A0A1W2PPE3 182 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 RBFOX3A6NFN3 312 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 ZNF724A8MTY0 619 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 TRDCB7Z8K6 153 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 TGOLN2O43493 480 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 CLN5O75503 358 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 DIRAS3O95661 229 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 HBE1P02100 147 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 FBP1P09467 338 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 HOXA5P20719 270 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 ANOS1P23352 680 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 RND3P61587 244 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 BAXQ07812 192 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 MALLQ13021 153 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 RNPS1Q15287 305 aaKnown RBP15.09■□□□□ 0.01
PCF11-207ENST00000624931 TAF9Q16594 264 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms