RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 PIGYQ3MUY2 71 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 DTX1Q86Y01 620 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 SSC4DQ8WTU2 575 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 PAM16Q9Y3D7 125 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 HOXB2P14652 356 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 EGR1P18146 543 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 S100A7P31151 101 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 CCKARP32238 428 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 UCP3P55916 312 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 HNRNPKP61978 463 aaKnown RBP eCLIP13.13□□□□□ -0.31
PMS1-221ENST00000624204 SMAD4Q13485 552 aaKnown RBP13.13□□□□□ -0.31
PMS1-221ENST00000624204 TMEM241Q24JQ0 296 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 RNF151Q2KHN1 245 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 TOMM20LQ6UXN7 152 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 MAML2Q8IZL2 1156 aaPredicted RBP13.13□□□□□ -0.31
PMS1-221ENST00000624204 PRR18Q8N4B5 295 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 OR51G1Q8NGK1 321 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 B4E171 279 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 TOX3O15405 576 aaPredicted RBP13.13□□□□□ -0.31
PMS1-221ENST00000624204 DEFA4P12838 97 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 CEACAM1P13688 526 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 SELEP16581 610 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 CHRNA7P36544 502 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 TSPAN7P41732 249 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 FAM3BP58499 235 aaPredicted RBP13.13□□□□□ -0.31
PMS1-221ENST00000624204 TRA2AQ13595 282 aaKnown RBP eCLIP13.13□□□□□ -0.31
PMS1-221ENST00000624204 TBC1D26Q86UD7 250 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 CARFQ8N187 725 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 OR10G4Q8NGN3 311 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 TMEM170AQ8WVE7 144 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 Q9N2K0 584 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 NAT8Q9UHE5 227 aa13.13□□□□□ -0.31
PMS1-221ENST00000624204 IGHV3-15A0A0B4J1V0 119 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 ZNF816-ZNF321PA0A0X1KG74 233 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 BLACEA4D250 179 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 LRRC3CA6NJW4 275 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 VSTM2BA6NLU5 285 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 TMEM210A6NLX4 147 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 GNRH1P01148 92 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 IGKV3-11P04433 115 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 LINC00271P0C7V0 271 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 GUCA1AP43080 201 aaPredicted RBP13.12□□□□□ -0.31
PMS1-221ENST00000624204 COA6Q5JTJ3 125 aaKnown RBP13.12□□□□□ -0.31
PMS1-221ENST00000624204 OR13H1Q8NG92 308 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 OR5L2Q8NGL0 311 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 TMEM222Q9H0R3 208 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 PARD6AQ9NPB6 346 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 PATE4P0C8F1 98 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 HNRNPA2B1P22626 353 aaKnown RBP13.12□□□□□ -0.31
PMS1-221ENST00000624204 ZP4Q12836 540 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 MYBPHQ13203 477 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 TMEM196Q5HYL7 178 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 SSX7Q7RTT5 188 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 D2HGDHQ8N465 521 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 OR51H1Q8NH63 302 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 MOB3AQ96BX8 217 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 DDIT4LQ96D03 193 aa13.12□□□□□ -0.31
PMS1-221ENST00000624204 A0A1W2PQD3 144 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 DHRS3O75911 302 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 OR7C1O76099 320 aaPredicted RBP13.11□□□□□ -0.31
PMS1-221ENST00000624204 PPYP01298 95 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 ARL4DP49703 201 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 ZNF92Q03936 586 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 ERASQ7Z444 233 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 ODF3L1Q8IXM7 274 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 TMEM256Q8N2U0 113 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 OR1K1Q8NGR3 316 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 DNASE2BQ8WZ79 361 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 FGF14Q92915 247 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 OR51I2Q9H344 312 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 NCOA6Q14686 2063 aaPredicted RBP13.11□□□□□ -0.31
PMS1-221ENST00000624204 COL6A3P12111 3177 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 M0QZK8 103 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 GGCTO75223 188 aaKnown RBP13.11□□□□□ -0.31
PMS1-221ENST00000624204 CA11O75493 328 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 TNFP01375 233 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 MYF5P13349 255 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 CNN1P51911 297 aaKnown RBP13.11□□□□□ -0.31
PMS1-221ENST00000624204 MRPS11P82912 194 aaKnown RBP13.11□□□□□ -0.31
PMS1-221ENST00000624204 NOGQ13253 232 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 ZNF573Q86YE8 665 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 SPPL3Q8TCT6 385 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 OIT3Q8WWZ8 545 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 DOCK7Q96N67 2140 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 RBM24Q9BX46 236 aaKnown RBP13.11□□□□□ -0.31
PMS1-221ENST00000624204 ANGPTL4Q9BY76 406 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 PLA2G2FQ9BZM2 168 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 C11orf1Q9H5F2 150 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 PATZ1Q9HBE1 687 aaKnown RBP13.11□□□□□ -0.31
PMS1-221ENST00000624204 LPAR2Q9HBW0 351 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 CPAMD8Q8IZJ3 1885 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 TP53I11O14683 189 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 SIAH2O43255 324 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 TNFSF10P50591 281 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 CARD18P57730 90 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 OR2T10Q8NGZ9 312 aa13.11□□□□□ -0.31
PMS1-221ENST00000624204 LOC102724200A0A096LPH7 203 aaPredicted RBP13.1□□□□□ -0.31
PMS1-221ENST00000624204 MAP1LC3B2A6NCE7 125 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 ZNF737O75373 536 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 COL9A1P20849 921 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms