RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 GNMTQ14749 295 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 MEX3BQ6ZN04 569 aaKnown RBP8.04□□□□□ -1.12
PDPN-212ENST00000621990 C20orf204Q6ZNR8 217 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 MDP1Q86V88 176 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 FAM58AQ8N1B3 248 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 ZNF565Q8N9K5 539 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 OR5D13Q8NGL4 314 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 OR8U1Q8NH10 309 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 WNT2BQ93097 391 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 ADAT1Q9BUB4 502 aaKnown RBP8.04□□□□□ -1.12
PDPN-212ENST00000621990 TREM2Q9NZC2 230 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 NCOR1O75376 2440 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 TRGV5A0A0B4J1U4 118 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 C9JQL5 133 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 J3QT63 122 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 ZNF806P0C7X5 589 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 MMP9P14780 707 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 NPBWR1P48145 328 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 EWSR1Q01844 656 aaKnown RBP eCLIP8.03□□□□□ -1.12
PDPN-212ENST00000621990 NHLH2Q02577 135 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 TGIF1Q15583 401 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 ZNF324BQ6AW86 544 aaPredicted RBP8.03□□□□□ -1.12
PDPN-212ENST00000621990 CLEC9AQ6UXN8 241 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 C5orf24Q7Z6I8 188 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 ZNF695Q8IW36 515 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 OR2C3Q8N628 320 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 PLPPR1Q8TBJ4 325 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 SECTM1Q8WVN6 248 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 C12orf49Q9H741 205 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 LYRM2Q9NU23 88 aaPredicted RBP8.03□□□□□ -1.12
PDPN-212ENST00000621990 UBE2J1Q9Y385 318 aaPredicted RBP8.03□□□□□ -1.12
PDPN-212ENST00000621990 SLC34A2O95436 690 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 VDAC1P21796 283 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 SNCAP37840 140 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 NKX2-1P43699 371 aaPredicted RBP8.03□□□□□ -1.12
PDPN-212ENST00000621990 ID4P47928 161 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 ERVK11-1P61568 191 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 FLI1Q01543 452 aaPredicted RBP8.03□□□□□ -1.12
PDPN-212ENST00000621990 ID3Q02535 119 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 SWI5Q1ZZU3 235 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 ZNF766Q5HY98 468 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 Q6P435 159 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 H1FOOQ8IZA3 346 aaPredicted RBP8.03□□□□□ -1.12
PDPN-212ENST00000621990 GMPPAQ96IJ6 420 aaPredicted RBP8.03□□□□□ -1.12
PDPN-212ENST00000621990 KIRREL1Q96J84 757 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 LUZP4Q9P127 313 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 CACFD1Q9UGQ2 172 aa8.03□□□□□ -1.12
PDPN-212ENST00000621990 STRAPQ9Y3F4 350 aaKnown RBP8.03□□□□□ -1.12
PDPN-212ENST00000621990 HSPB6O14558 160 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 PITX3O75364 302 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 PGLYRP1O75594 196 aaPredicted RBP8.02□□□□□ -1.12
PDPN-212ENST00000621990 F12P00748 615 aaPredicted RBP8.02□□□□□ -1.12
PDPN-212ENST00000621990 HLA-DRB3P79483 266 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 SPIN3Q5JUX0 258 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 SHEQ5VZ18 495 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 TMEM88Q6PEY1 159 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 CBLN2Q8IUK8 224 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 CMTM1Q8IZ96 169 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 IL22RA1Q8N6P7 574 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 ZNF488Q96MN9 340 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 DEFB127Q9H1M4 99 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 TMEM9BQ9NQ34 198 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 DLL3Q9NYJ7 618 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 OR2W1Q9Y3N9 320 aa8.02□□□□□ -1.12
PDPN-212ENST00000621990 SPENQ96T58 3664 aaKnown RBP8.02□□□□□ -1.13
PDPN-212ENST00000621990 ESPL1Q14674 2120 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 PIGBOS1A0A0B4J2F0 54 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 IGSF23A1L1A6 192 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 LRP5LA4QPB2 252 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.02□□□□□ -1.13
PDPN-212ENST00000621990 DEGS1O15121 323 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 SMPD2O60906 423 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 RHBDL1O75783 438 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 SLC25A6P12236 298 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 CA6P23280 308 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 PAX6P26367 422 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 CD80P33681 288 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 MDH2P40926 338 aaKnown RBP8.02□□□□□ -1.13
PDPN-212ENST00000621990 GUSBP1Q15486 140 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 HMGN3Q15651 99 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 TBC1D28Q2M2D7 210 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 ATP1A1-AS1Q5TC04 95 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 OR2T2Q6IF00 324 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 WDR86Q86TI4 376 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 Q8IYB0 196 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 TMEM178AQ8NBL3 297 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 NEK7Q8TDX7 302 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 SH3BGRL3Q9H299 93 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 PLEKHF2Q9H8W4 249 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 CCL28Q9NRJ3 127 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 GLRX2Q9NS18 164 aa8.02□□□□□ -1.13
PDPN-212ENST00000621990 A0A1B0GW64 132 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 ADAM20O43506 726 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 TSPAN15O95858 294 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 IGHG3P01860 377 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 PVALBP20472 110 aaPredicted RBP8.01□□□□□ -1.13
PDPN-212ENST00000621990 F2RP25116 425 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 CD82P27701 267 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 TNFSF10P50591 281 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 ZNF266Q14584 549 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms