RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 PELI1Q96FA3 418 aa13.09□□□□□ -0.31
TARDBP-225ENST00000621715 HSPB9Q9BQS6 159 aa13.09□□□□□ -0.31
TARDBP-225ENST00000621715 PCDHB16Q9NRJ7 776 aa13.09□□□□□ -0.31
TARDBP-225ENST00000621715 AMMECR1Q9Y4X0 333 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-225ENST00000621715 IGHV1-3A0A0C4DH29 117 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 C3orf84H3BNL1 204 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 HSD17B6O14756 317 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 TMEM225BP0DP42 221 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 ATP6V1E1P36543 226 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 RAB7AP51149 207 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 SLC35B1P78383 322 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 KIR2DS1Q14954 304 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 KISS1Q15726 138 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 PIGYQ3MUY2 71 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 PAN3Q58A45 887 aaKnown RBP13.08□□□□□ -0.32
TARDBP-225ENST00000621715 CASC10Q5T4H9 136 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 ASPHD1Q5U4P2 390 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 LPCAT4Q643R3 524 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 TEX38Q6PEX7 206 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 FOXRED2Q8IWF2 684 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 OR8H3Q8N146 312 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 COMMD1Q8N668 190 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 RNF152Q8N8N0 203 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 TMEM104Q8NE00 496 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 OR10K1Q8NGX5 313 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 CNIH3Q8TBE1 160 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 GABARAPL3Q9BY60 117 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 ABCG5Q9H222 651 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 ZCCHC4Q9H5U6 513 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 AASSQ9UDR5 926 aa13.08□□□□□ -0.32
TARDBP-225ENST00000621715 HYDINQ4G0P3 5121 aa13.07□□□□□ -0.32
TARDBP-225ENST00000621715 SEC14L6B5MCN3 397 aa13.07□□□□□ -0.32
TARDBP-225ENST00000621715 SLC16A6O15403 523 aa13.07□□□□□ -0.32
TARDBP-225ENST00000621715 GYG2O15488 501 aa13.07□□□□□ -0.32
TARDBP-225ENST00000621715 ZNF816Q0VGE8 651 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-225ENST00000621715 FHL3Q13643 280 aa13.07□□□□□ -0.32
TARDBP-225ENST00000621715 C9orf66Q5T8R8 295 aa13.07□□□□□ -0.32
TARDBP-225ENST00000621715 MOB3BQ86TA1 216 aa13.07□□□□□ -0.32
TARDBP-225ENST00000621715 OR8J1Q8NGP2 316 aa13.07□□□□□ -0.32
TARDBP-225ENST00000621715 RIBC2Q9H4K1 309 aa13.07□□□□□ -0.32
TARDBP-225ENST00000621715 RHOFQ9HBH0 211 aa13.07□□□□□ -0.32
TARDBP-225ENST00000621715 NCBP2LA6PVI3 153 aaKnown RBP13.06□□□□□ -0.32
TARDBP-225ENST00000621715 E9PI62 339 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 AP4M1O00189 453 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 OCM2P0CE71 109 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 OCMP0CE72 109 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-225ENST00000621715 CDX1P47902 265 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-225ENST00000621715 MTNR1BP49286 362 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 CCR9P51686 369 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 GPR50Q13585 617 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 PNLIPRP3Q17RR3 467 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 ZNF691Q5VV52 312 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 ELP2Q6IA86 826 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 TGIF2LXQ8IUE1 241 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 IZUMO1Q8IYV9 350 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 ZNF565Q8N9K5 539 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 OR51A2Q8NGJ7 313 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 OR5M8Q8NGP6 311 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 OR10X1Q8NGY0 326 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 OR8U1Q8NH10 309 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 HAVCR2Q8TDQ0 301 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 RNFT2Q96EX2 444 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 CYYR1Q96J86 154 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 NCOR1P1Q9H4R4 102 aa13.06□□□□□ -0.32
TARDBP-225ENST00000621715 ISG20L2Q9H9L3 353 aaKnown RBP13.06□□□□□ -0.32
TARDBP-225ENST00000621715 C15orf65H3BRN8 121 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 J3QLW9 94 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 CCRL2O00421 344 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 GABRPO00591 440 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 SLC31A2O15432 143 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 ZFPL1O95159 310 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 HCKP08631 526 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 HTR1AP08908 422 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 ZNF19P17023 458 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 C21orf33P30042 268 aaPredicted RBP13.05□□□□□ -0.32
TARDBP-225ENST00000621715 F2RL1P55085 397 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 PAX5Q02548 391 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 TMED1Q13445 227 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 FOXE3Q13461 319 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 ALKBH1Q13686 389 aaKnown RBP13.05□□□□□ -0.32
TARDBP-225ENST00000621715 KIAA0141Q14154 515 aaPredicted RBP13.05□□□□□ -0.32
TARDBP-225ENST00000621715 ZNF260Q3ZCT1 412 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 DNAL1Q4LDG9 190 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 ZDHHC13Q8IUH4 622 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 SBSPONQ8IVN8 264 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 ST6GALNAC6Q969X2 333 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 C4orf36Q96KX1 117 aa13.05□□□□□ -0.32
TARDBP-225ENST00000621715 LIN7CQ9NUP9 197 aaKnown RBP13.05□□□□□ -0.32
TARDBP-225ENST00000621715 DAPL1A0PJW8 107 aa13.04□□□□□ -0.32
TARDBP-225ENST00000621715 SULT1B1O43704 296 aa13.04□□□□□ -0.32
TARDBP-225ENST00000621715 CXorf66Q5JRM2 361 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-225ENST00000621715 MUC7Q8TAX7 377 aa13.04□□□□□ -0.32
TARDBP-225ENST00000621715 S1PR3Q99500 378 aa13.04□□□□□ -0.32
TARDBP-225ENST00000621715 KLK15Q9H2R5 256 aa13.04□□□□□ -0.32
TARDBP-225ENST00000621715 GNB4Q9HAV0 340 aa13.04□□□□□ -0.32
TARDBP-225ENST00000621715 ZMAT5Q9UDW3 170 aaKnown RBP13.04□□□□□ -0.32
TARDBP-225ENST00000621715 OAZ3Q9UMX2 235 aa13.04□□□□□ -0.32
TARDBP-225ENST00000621715 ZNF256Q9Y2P7 627 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-225ENST00000621715 IGHV3-43A0A0B4J1X8 118 aa13.03□□□□□ -0.32
TARDBP-225ENST00000621715 IGHG4P01861 327 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms