RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 CTSDP07339 412 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-219ENST00000620786 MIDNQ504T8 468 aa9.94□□□□□ -0.82
CLIP1-219ENST00000620786 DMKNQ6E0U4 476 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-219ENST00000620786 NFAM1Q8NET5 270 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-219ENST00000620786 ZNF519Q8TB69 540 aa9.94□□□□□ -0.82
CLIP1-219ENST00000620786 RNF133Q8WVZ7 376 aa9.94□□□□□ -0.82
CLIP1-219ENST00000620786 MYO7AQ13402 2215 aa9.94□□□□□ -0.82
CLIP1-219ENST00000620786 IGHV3-21A0A0B4J1V1 117 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 G6PCP35575 357 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 SSX1Q16384 188 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 CCL28Q9NRJ3 127 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 RPL36A-HNRNPH2H7BZ11 118 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 FFAR1O14842 300 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 GSTZ1O43708 216 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-219ENST00000620786 ZNF737O75373 536 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 FAM106CPP0CH98 169 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 PTTG1IPP53801 180 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 GUCA2BQ16661 112 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 NOL4LQ96MY1 436 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-219ENST00000620786 HS3ST3B1Q9Y662 390 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 COL4A1P02462 1669 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 A0A1W2PQM1 296 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 SYNGR1O43759 233 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 CLDN14O95500 239 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 C1QAP02745 245 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 NAT2P11245 290 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 PSG4Q00888 419 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 C2CD4CQ8TF44 421 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 ITLN1Q8WWA0 313 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 IL17BQ9UHF5 180 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 OGG1O15527 345 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 SPINK4O60575 86 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 PDLIM4P50479 330 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 DYNLT3P51808 116 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 RPL30P62888 115 aaKnown RBP9.93□□□□□ -0.82
CLIP1-219ENST00000620786 CTF1Q16619 201 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 SLC25A42Q86VD7 318 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 OR2C3Q8N628 320 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 SLC26A10Q8NG04 563 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 DTD1Q8TEA8 209 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 RHOFQ9HBH0 211 aa9.93□□□□□ -0.82
CLIP1-219ENST00000620786 GATCO43716 136 aaKnown RBP9.92□□□□□ -0.82
CLIP1-219ENST00000620786 TSPAN2O60636 221 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 RAB5AP20339 215 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 ZP4Q12836 540 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 CHST5Q9GZS9 411 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 VSIG4Q9Y279 399 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 IGKV1-8A0A0C4DH67 115 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 K7N7A8 449 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 TGOLN2O43493 480 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 NGFRP08138 427 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 LSM11P83369 360 aaKnown RBP eCLIP9.92□□□□□ -0.82
CLIP1-219ENST00000620786 DGAT2L7PQ6IED9 249 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 FAM181AQ8N9Y4 354 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 TMPRSS5Q9H3S3 457 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 SLC7A10Q9NS82 523 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 TECRQ9NZ01 308 aaKnown RBP9.92□□□□□ -0.82
CLIP1-219ENST00000620786 ZDHHC8Q9ULC8 765 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 CASP8AP2Q9UKL3 1982 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 ARPC4-TTLL3A0A0A6YYG9 625 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 FGF8P55075 233 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-219ENST00000620786 MRGPRGQ86SM5 289 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 OR4A4PQ8NGN8 299 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 ZNF552Q9H707 407 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-219ENST00000620786 PRR13Q9NZ81 148 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 ATP6V1G2-DDX39BF2Z307 99 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 POLR2GP62487 172 aaKnown RBP eCLIP9.92□□□□□ -0.82
CLIP1-219ENST00000620786 RPEL1Q2QD12 228 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 TCTE3Q8IZS6 198 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 OR8I2Q8N0Y5 310 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 SFXN3Q9BWM7 321 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 OR51B2Q9Y5P1 312 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 TRAPPC1Q9Y5R8 145 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 TRIP12Q14669 1992 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-219ENST00000620786 CENPVL1A0A0U1RR11 272 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 SFTA3P0C7M3 94 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 RPS4Y1P22090 263 aaKnown RBP9.92□□□□□ -0.82
CLIP1-219ENST00000620786 PPP1CCP36873 323 aaKnown RBP9.92□□□□□ -0.82
CLIP1-219ENST00000620786 RPS4Y2Q8TD47 263 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 AUP1Q9Y679 476 aa9.92□□□□□ -0.82
CLIP1-219ENST00000620786 RNASEK-C17orf49H0YIS7 233 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 HTR1DP28221 377 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 KRTDAPP60985 99 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 C10orf113Q5VZT2 155 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 RNASEKQ6P5S7 137 aaKnown RBP9.91□□□□□ -0.82
CLIP1-219ENST00000620786 FAM219AQ8IW50 185 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 OR1K1Q8NGR3 316 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 OR2W1Q9Y3N9 320 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 NEURL1O76050 574 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 GAPDHP04406 335 aaKnown RBP9.91□□□□□ -0.82
CLIP1-219ENST00000620786 OR1L8Q8NGR8 309 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 ANKRD20A5PA0PJZ0 165 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 SYNGR2O43760 224 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 PPYP01298 95 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 PF4V1P10720 104 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 NQO2P16083 231 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 FAM27BQ5VT28 67 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 OR4X1Q8NH49 305 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 TRIM77I1YAP6 450 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms