RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 UCN2Q96RP3 112 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 TRAV20A0A0B4J274 112 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 SPINK2P20155 84 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 LPAR6P43657 344 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 C3AR1Q16581 482 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 LYZL2Q7Z4W2 148 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 OR1B1Q8NGR6 318 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 ZNF519Q8TB69 540 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 ADIPOR1Q96A54 375 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 RBM14Q96PK6 669 aaKnown RBP7.31□□□□□ -1.24
ALMS1-208ENST00000620466 RAB40CQ96S21 281 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 CDX2Q99626 313 aaPredicted RBP7.31□□□□□ -1.24
ALMS1-208ENST00000620466 PARP11Q9NR21 331 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 FKBP11Q9NYL4 201 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 YTHDF2Q9Y5A9 579 aaKnown RBP7.31□□□□□ -1.24
ALMS1-208ENST00000620466 LYZP61626 148 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 ZXDAP98168 799 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 ROM1Q03395 351 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 SLC38A11Q08AI6 406 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 PLPPR5Q32ZL2 321 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 ACER2Q5QJU3 275 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 NPDC1Q9NQX5 325 aaPredicted RBP7.31□□□□□ -1.24
ALMS1-208ENST00000620466 ZNF586Q9NXT0 402 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 ZNF716A6NP11 495 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 KRTDAPP60985 99 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 TMEM208Q9BTX3 173 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 CACNG5Q9UF02 275 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 KCNMB2Q9Y691 235 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 WDR81Q562E7 1941 aa7.31□□□□□ -1.24
ALMS1-208ENST00000620466 IGHV5-10-1A0A0J9YXX1 117 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 MEX3AA1L020 520 aaKnown RBP7.3□□□□□ -1.24
ALMS1-208ENST00000620466 TRDCB7Z8K6 153 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 C3orf80F5H4A9 247 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 HRASP01112 189 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 ISG15P05161 165 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 CCL3P10147 92 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 ZNF154Q13106 437 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 TNXAQ16473 311 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 CHST5Q9GZS9 411 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 DOK5Q9P104 306 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 LIPGQ9Y5X9 500 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 PDE4DIPQ5VU43 2346 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 MPGP29372 298 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 GUCA2BQ16661 112 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 IGSF11Q5DX21 431 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 KCNK17Q96T54 332 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 ATP5SQ99766 215 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 SF3B5Q9BWJ5 86 aaKnown RBP7.3□□□□□ -1.24
ALMS1-208ENST00000620466 KRASP01116 189 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 GALR1P47211 349 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 FAM3AP98173 230 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 EWSR1Q01844 656 aaKnown RBP eCLIP7.3□□□□□ -1.24
ALMS1-208ENST00000620466 TMEM255AQ5JRV8 349 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 NR2C2APQ86WQ0 139 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 OR10D4PQ8NGN7 298 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 OR2H1Q9GZK4 316 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 MYLKQ15746 1914 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 SCN3AQ9NY46 2000 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 F2RL2O00254 374 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 MFNGO00587 321 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 ZNF737O75373 536 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 SCGB1C2P0DMR2 95 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 DHRS7BQ6IAN0 325 aaPredicted RBP7.3□□□□□ -1.24
ALMS1-208ENST00000620466 GAPTQ8N292 157 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 NEIL1Q96FI4 390 aaPredicted RBP7.3□□□□□ -1.24
ALMS1-208ENST00000620466 LPAR5Q9H1C0 372 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 G6PC2Q9NQR9 355 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 CDRT15L2A8MXV6 281 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 CRXO43186 299 aaPredicted RBP7.3□□□□□ -1.24
ALMS1-208ENST00000620466 PGA4P0DJD7 388 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 TPPP2P59282 170 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 RAC3P60763 192 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 EGR4Q05215 589 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 MOB1BQ7L9L4 216 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 SLC2A9Q9NRM0 540 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 TRAPPC1Q9Y5R8 145 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 PLXNA3P51805 1871 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 MBPP02686 304 aaPredicted RBP7.3□□□□□ -1.24
ALMS1-208ENST00000620466 BTCP35070 178 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 ZNF273Q14593 569 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 RPEL1Q2QD12 228 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 VAX1Q5SQQ9 334 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 NCMAPQ5T1S8 102 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 ZNF574Q6ZN55 896 aaPredicted RBP7.3□□□□□ -1.24
ALMS1-208ENST00000620466 LURAP1Q96LR2 239 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 SEBOXQ9HB31 216 aaPredicted RBP7.3□□□□□ -1.24
ALMS1-208ENST00000620466 FAM206AQ9NX38 181 aa7.3□□□□□ -1.24
ALMS1-208ENST00000620466 ZNF646O15015 1829 aaPredicted RBP7.29□□□□□ -1.24
ALMS1-208ENST00000620466 MAP1LC3B2A6NCE7 125 aa7.29□□□□□ -1.24
ALMS1-208ENST00000620466 CEACAM3P40198 252 aa7.29□□□□□ -1.24
ALMS1-208ENST00000620466 LGALS7P47929 136 aa7.29□□□□□ -1.24
ALMS1-208ENST00000620466 RNASEKQ6P5S7 137 aaKnown RBP7.29□□□□□ -1.24
ALMS1-208ENST00000620466 RASL11BQ9BPW5 248 aa7.29□□□□□ -1.24
ALMS1-208ENST00000620466 MAP1LC3BQ9GZQ8 125 aa7.29□□□□□ -1.24
ALMS1-208ENST00000620466 PRRC2BQ5JSZ5 2229 aaKnown RBP7.29□□□□□ -1.24
ALMS1-208ENST00000620466 LOC101059948A0A1B0GTJ6 334 aa7.29□□□□□ -1.24
ALMS1-208ENST00000620466 A0A1W2PP11 408 aa7.29□□□□□ -1.24
ALMS1-208ENST00000620466 NKX2-6A6NCS4 301 aa7.29□□□□□ -1.24
ALMS1-208ENST00000620466 PPYP01298 95 aa7.29□□□□□ -1.24
ALMS1-208ENST00000620466 MUC1P15941 1255 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms