RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 FAM90A13PP0C7W8 464 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 FAM90A14PP0C7W9 464 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 FAM90A24PP0C7X0 464 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 ETV1P50549 477 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 PIGYQ3MUY2 71 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 ABCA11PQ4W5N1 156 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 TCTEX1D4Q5JR98 221 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 PLPPR1Q8TBJ4 325 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 CAPSLQ8WWF8 208 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 STMN2Q93045 179 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 BARHL1Q9BZE3 327 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 AMMECR1Q9Y4X0 333 aaPredicted RBP17.54■□□□□ 0.4
SRRT-218ENST00000620394 TENM3Q9P273 2699 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 A0A1W2PRX2 142 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 PF4P02776 101 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 NFYBP25208 207 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 MNDAP41218 407 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 OR3A4PP47883 348 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 CD69Q07108 199 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 RSU1Q15404 277 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 DEFB121Q5J5C9 76 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 OR2G6Q5TZ20 316 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 THNSL2Q86YJ6 484 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 OR10A7Q8NGE5 316 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 OR10K1Q8NGX5 313 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 SMIM19Q96E16 107 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 NR1H4Q96RI1 486 aaPredicted RBP17.53■□□□□ 0.4
SRRT-218ENST00000620394 FAM192AQ9GZU8 254 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 TMEM138Q9NPI0 162 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 IDI2-AS1Q9NZ38 188 aa17.53■□□□□ 0.4
SRRT-218ENST00000620394 IRGMA1A4Y4 181 aa17.52■□□□□ 0.4
SRRT-218ENST00000620394 J3QR06 171 aa17.52■□□□□ 0.4
SRRT-218ENST00000620394 OGG1O15527 345 aa17.52■□□□□ 0.4
SRRT-218ENST00000620394 LPLP06858 475 aa17.52■□□□□ 0.4
SRRT-218ENST00000620394 C21orf33P30042 268 aaPredicted RBP17.52■□□□□ 0.4
SRRT-218ENST00000620394 RBM11P57052 281 aaKnown RBP17.52■□□□□ 0.4
SRRT-218ENST00000620394 RBM39Q14498 530 aaKnown RBP17.52■□□□□ 0.4
SRRT-218ENST00000620394 TMPRSS11AQ6ZMR5 421 aa17.52■□□□□ 0.4
SRRT-218ENST00000620394 SATL1Q86VE3 508 aa17.52■□□□□ 0.4
SRRT-218ENST00000620394 ZNF555Q8NEP9 628 aa17.52■□□□□ 0.4
SRRT-218ENST00000620394 TOMM40LQ969M1 308 aa17.52■□□□□ 0.4
SRRT-218ENST00000620394 RPEQ96AT9 228 aa17.52■□□□□ 0.4
SRRT-218ENST00000620394 DIMT1Q9UNQ2 313 aaKnown RBP17.52■□□□□ 0.4
SRRT-218ENST00000620394 SIRT4Q9Y6E7 314 aaPredicted RBP17.52■□□□□ 0.4
SRRT-218ENST00000620394 A0A1W2PPI3 338 aa17.51■□□□□ 0.39
SRRT-218ENST00000620394 PPP3R1P63098 170 aa17.51■□□□□ 0.39
SRRT-218ENST00000620394 DDI2Q5TDH0 399 aa17.51■□□□□ 0.39
SRRT-218ENST00000620394 SLC16A12Q6ZSM3 486 aa17.51■□□□□ 0.39
SRRT-218ENST00000620394 LINC00596Q86U02 117 aa17.51■□□□□ 0.39
SRRT-218ENST00000620394 MRGPRDQ8TDS7 321 aa17.51■□□□□ 0.39
SRRT-218ENST00000620394 B9D2Q9BPU9 175 aa17.51■□□□□ 0.39
SRRT-218ENST00000620394 DPCDQ9BVM2 203 aaPredicted RBP17.51■□□□□ 0.39
SRRT-218ENST00000620394 ZNF581Q9P0T4 197 aa17.51■□□□□ 0.39
SRRT-218ENST00000620394 PSG11Q9UQ72 335 aa17.51■□□□□ 0.39
SRRT-218ENST00000620394 MOB4Q9Y3A3 225 aa17.51■□□□□ 0.39
SRRT-218ENST00000620394 HSPE1-MOB4S4R3N1 261 aa17.51■□□□□ 0.39
SRRT-218ENST00000620394 TRBV5-5A0A0J9YX44 114 aa17.5■□□□□ 0.39
SRRT-218ENST00000620394 WI2-2373I1.2A0A1W2PRP0 233 aa17.5■□□□□ 0.39
SRRT-218ENST00000620394 EBAG9O00559 213 aa17.5■□□□□ 0.39
SRRT-218ENST00000620394 CDRT1O95170 752 aa17.5■□□□□ 0.39
SRRT-218ENST00000620394 HTR3BO95264 441 aa17.5■□□□□ 0.39
SRRT-218ENST00000620394 IGFBP3P17936 291 aaPredicted RBP17.5■□□□□ 0.39
SRRT-218ENST00000620394 SSTR5P35346 364 aa17.5■□□□□ 0.39
SRRT-218ENST00000620394 ZNF93P35789 620 aaPredicted RBP17.5■□□□□ 0.39
SRRT-218ENST00000620394 MADCAM1Q13477 382 aa17.5■□□□□ 0.39
SRRT-218ENST00000620394 SUMF2Q8NBJ7 301 aa17.5■□□□□ 0.39
SRRT-218ENST00000620394 ST3GAL6Q9Y274 331 aa17.5■□□□□ 0.39
SRRT-218ENST00000620394 EXOSC1Q9Y3B2 195 aaKnown RBP17.5■□□□□ 0.39
SRRT-218ENST00000620394 TSSC4Q9Y5U2 329 aaPredicted RBP17.5■□□□□ 0.39
SRRT-218ENST00000620394 LALBAP00709 142 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 FAM106CPP0CH98 169 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 BDKRB2P30411 391 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 KRTAP10-11P60412 298 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 EGFEM1PQ0D2K5 195 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 DCTN2Q13561 401 aaKnown RBP17.49■□□□□ 0.39
SRRT-218ENST00000620394 DMKNQ6E0U4 476 aaPredicted RBP17.49■□□□□ 0.39
SRRT-218ENST00000620394 CENPVQ7Z7K6 275 aaPredicted RBP17.49■□□□□ 0.39
SRRT-218ENST00000620394 OR8H3Q8N146 312 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 OSR2Q8N2R0 312 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 ZNF485Q8NCK3 441 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 OR4X2Q8NGF9 303 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 OR52N1Q8NH53 320 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 OR56B4Q8NH76 319 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 LEAP2Q969E1 77 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 MYDGFQ969H8 173 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 METTL9Q9H1A3 318 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 BABAM2Q9NXR7 383 aa17.49■□□□□ 0.39
SRRT-218ENST00000620394 SH2D7A6NKC9 451 aaPredicted RBP17.48■□□□□ 0.39
SRRT-218ENST00000620394 GPX5O75715 221 aa17.48■□□□□ 0.39
SRRT-218ENST00000620394 CLIC3O95833 236 aa17.48■□□□□ 0.39
SRRT-218ENST00000620394 SNRNP70P08621 437 aaKnown RBP17.48■□□□□ 0.39
SRRT-218ENST00000620394 MYL12AP19105 171 aa17.48■□□□□ 0.39
SRRT-218ENST00000620394 FSTP19883 344 aa17.48■□□□□ 0.39
SRRT-218ENST00000620394 RAB7AP51149 207 aa17.48■□□□□ 0.39
SRRT-218ENST00000620394 RIPK1Q13546 671 aa17.48■□□□□ 0.39
SRRT-218ENST00000620394 MPV17LQ2QL34 196 aa17.48■□□□□ 0.39
SRRT-218ENST00000620394 OR13C5Q8NGS8 318 aa17.48■□□□□ 0.39
SRRT-218ENST00000620394 PGLYRP3Q96LB9 341 aa17.48■□□□□ 0.39
SRRT-218ENST00000620394 GPR61Q9BZJ8 451 aa17.48■□□□□ 0.39
SRRT-218ENST00000620394 PAK1IP1Q9NWT1 392 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms