RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 WIPI2Q9Y4P8 454 aa12.9□□□□□ -0.34
PSMC3-213ENST00000619920 SHANK1Q9Y566 2161 aa12.9□□□□□ -0.34
PSMC3-213ENST00000619920 CADP27708 2225 aa12.9□□□□□ -0.35
PSMC3-213ENST00000619920 HMSDA8MTL9 139 aa12.9□□□□□ -0.35
PSMC3-213ENST00000619920 NPIPB11E5RHQ5 1161 aa12.9□□□□□ -0.35
PSMC3-213ENST00000619920 ADH4P08319 380 aa12.9□□□□□ -0.35
PSMC3-213ENST00000619920 PIGPP57054 158 aa12.9□□□□□ -0.35
PSMC3-213ENST00000619920 FXYD4P59646 89 aa12.9□□□□□ -0.35
PSMC3-213ENST00000619920 LY6DQ14210 128 aa12.9□□□□□ -0.35
PSMC3-213ENST00000619920 HERPUD1Q15011 391 aa12.9□□□□□ -0.35
PSMC3-213ENST00000619920 SLC35E4Q6ICL7 350 aa12.9□□□□□ -0.35
PSMC3-213ENST00000619920 FAM185AQ8N0U4 392 aa12.9□□□□□ -0.35
PSMC3-213ENST00000619920 WDR89Q96FK6 387 aaPredicted RBP12.9□□□□□ -0.35
PSMC3-213ENST00000619920 MBNL3Q9NUK0 354 aaKnown RBP12.9□□□□□ -0.35
PSMC3-213ENST00000619920 KCNIP3Q9Y2W7 256 aa12.9□□□□□ -0.35
PSMC3-213ENST00000619920 SPTA1P02549 2419 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 TRBV6-7A0A0A0MS04 114 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 IGKV1-6A0A0C4DH72 117 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 TEX13DA0A0J9YY54 714 aaPredicted RBP12.89□□□□□ -0.35
PSMC3-213ENST00000619920 TMEM30CPA0ZSE6 113 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 BET1O15155 118 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 LHBP01229 141 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 IGHV1-46P01743 117 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 OR4A8P0C604 315 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 RCC1P18754 421 aaPredicted RBP12.89□□□□□ -0.35
PSMC3-213ENST00000619920 TNFAIP6P98066 277 aaPredicted RBP12.89□□□□□ -0.35
PSMC3-213ENST00000619920 ADIPOQQ15848 244 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 ANKRD55Q3KP44 614 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 LGALSLQ3ZCW2 172 aaPredicted RBP12.89□□□□□ -0.35
PSMC3-213ENST00000619920 NCMAPQ5T1S8 102 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 PCSK4Q6UW60 755 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 MOGAT3Q86VF5 341 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 CCDC71LQ8N9Z2 235 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 OR5T2Q8NGG2 359 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 GRPEL2Q8TAA5 225 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 ITLN1Q8WWA0 313 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 GALNT14Q96FL9 552 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 PDCD10Q9BUL8 212 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 NDRG3Q9UGV2 375 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 TRAPPC2LQ9UL33 140 aa12.89□□□□□ -0.35
PSMC3-213ENST00000619920 RFPL4AA6NLU0 287 aa12.88□□□□□ -0.35
PSMC3-213ENST00000619920 RFPL4AL1F8VTS6 287 aa12.88□□□□□ -0.35
PSMC3-213ENST00000619920 PSPNO60542 156 aa12.88□□□□□ -0.35
PSMC3-213ENST00000619920 ZNF205O95201 554 aa12.88□□□□□ -0.35
PSMC3-213ENST00000619920 C4BPBP20851 252 aa12.88□□□□□ -0.35
PSMC3-213ENST00000619920 PRDX2P32119 198 aa12.88□□□□□ -0.35
PSMC3-213ENST00000619920 RBMXP38159 391 aaKnown RBP12.88□□□□□ -0.35
PSMC3-213ENST00000619920 CEBPDP49716 269 aaPredicted RBP12.88□□□□□ -0.35
PSMC3-213ENST00000619920 SNRPD2P62316 118 aaKnown RBP12.88□□□□□ -0.35
PSMC3-213ENST00000619920 CYCSP99999 105 aaKnown RBP12.88□□□□□ -0.35
PSMC3-213ENST00000619920 PAX5Q02548 391 aa12.88□□□□□ -0.35
PSMC3-213ENST00000619920 ATXN7L3Q14CW9 347 aaPredicted RBP12.88□□□□□ -0.35
PSMC3-213ENST00000619920 GSG1LQ6UXU4 331 aa12.88□□□□□ -0.35
PSMC3-213ENST00000619920 GCSAMQ8N6F7 178 aa12.88□□□□□ -0.35
PSMC3-213ENST00000619920 OR10J5Q8NHC4 309 aa12.88□□□□□ -0.35
PSMC3-213ENST00000619920 LILRB1Q8NHL6 650 aaPredicted RBP12.88□□□□□ -0.35
PSMC3-213ENST00000619920 VRK1Q99986 396 aaPredicted RBP12.88□□□□□ -0.35
PSMC3-213ENST00000619920 NAA60Q9H7X0 242 aa12.88□□□□□ -0.35
PSMC3-213ENST00000619920 SLC2A9Q9NRM0 540 aa12.88□□□□□ -0.35
PSMC3-213ENST00000619920 MED19A0JLT2 244 aaPredicted RBP12.87□□□□□ -0.35
PSMC3-213ENST00000619920 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.87□□□□□ -0.35
PSMC3-213ENST00000619920 CD55P08174 381 aa12.87□□□□□ -0.35
PSMC3-213ENST00000619920 EGR1P18146 543 aa12.87□□□□□ -0.35
PSMC3-213ENST00000619920 ADORA2A-AS1P86434 159 aa12.87□□□□□ -0.35
PSMC3-213ENST00000619920 SORDQ00796 357 aa12.87□□□□□ -0.35
PSMC3-213ENST00000619920 HMGN3Q15651 99 aa12.87□□□□□ -0.35
PSMC3-213ENST00000619920 H1FOOQ8IZA3 346 aaPredicted RBP12.87□□□□□ -0.35
PSMC3-213ENST00000619920 Q8TCH9 128 aa12.87□□□□□ -0.35
PSMC3-213ENST00000619920 RTN4IP1Q8WWV3 396 aaPredicted RBP12.87□□□□□ -0.35
PSMC3-213ENST00000619920 SUCNR1Q9BXA5 334 aa12.87□□□□□ -0.35
PSMC3-213ENST00000619920 NMES1Q9C002 83 aa12.87□□□□□ -0.35
PSMC3-213ENST00000619920 KCNIP1Q9NZI2 227 aa12.87□□□□□ -0.35
PSMC3-213ENST00000619920 COMMD9Q9P000 198 aa12.87□□□□□ -0.35
PSMC3-213ENST00000619920 FAM90A27PA6NNH2 459 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 FAM25EA8MYX2 175 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 CCSO14618 274 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 ATXN7O15265 892 aaPredicted RBP12.86□□□□□ -0.35
PSMC3-213ENST00000619920 PSG2P11465 335 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 GNRHRP30968 328 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 SERPINF1P36955 418 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 PLA2G5P39877 138 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 OR3A1P47881 315 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 RND3P61587 244 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 COL10A1Q03692 680 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 SPRNQ5BIV9 151 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 C5orf24Q7Z6I8 188 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 CD177Q8N6Q3 437 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 ZNF565Q8N9K5 539 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 KIRREL1Q96J84 757 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 GCM1Q9NP62 436 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 RNF7Q9UBF6 113 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 DNAJB11Q9UBS4 358 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 ERRFI1Q9UJM3 462 aaPredicted RBP12.86□□□□□ -0.35
PSMC3-213ENST00000619920 CHD8Q9HCK8 2581 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 C5orf51A6NDU8 294 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 SHISA9B4DS77 424 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 SLC25A4P12235 298 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 ADAM5Q6NVV9 412 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 TMEM65Q6PI78 240 aa12.86□□□□□ -0.35
PSMC3-213ENST00000619920 LRTM2Q8N967 370 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms