RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 MMP25Q9NPA2 562 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 ZNF320A2RRD8 509 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 C11orf98E9PRG8 122 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 NUPR1O60356 82 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 H2BFMP0C1H6 154 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 TMEM183BQ1AE95 376 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 ALG10Q5BKT4 473 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 OTOSQ8NHW6 89 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 ALG1L2C9J202 215 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 RAD51DO75771 328 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 TLE1Q04724 770 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 UBE2V1Q13404 147 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 CPEB2Q7Z5Q1 589 aaKnown RBP13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 NUDT11Q96G61 164 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 BANF2Q9H503 90 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 SLC5A6Q9Y289 635 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 EMC9Q9Y3B6 208 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 TRAV34A0A0B4J273 112 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 CER1O95813 267 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 UNQ5815/PRO19632Q6UWF5 114 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 FAM180AQ6UWF9 173 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 VN1R17PQ8TDU5 208 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 PTX4Q96A99 478 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 SDF2L1Q9HCN8 221 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 HHLA2Q9UM44 414 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 LOC102723971A0A1B0GUV8 181 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 FAM24AA6NFZ4 105 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 CEACAM18A8MTB9 384 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 ZNF43P17038 809 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 FSTP19883 344 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 GALR1P47211 349 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 CNN1P51911 297 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 ZNF441Q8N8Z8 693 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 EMG1Q92979 244 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 OR5B12Q96R08 314 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 VDAC3Q9Y277 283 aa13.72□□□□□ -0.21
SEMA3B-214ENST00000619119 IGLV3-12A0A075B6K2 115 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 PFN1P07737 140 aaKnown RBP13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 EWSR1Q01844 656 aaKnown RBP eCLIP13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 ZNF92Q03936 586 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 RPL18Q07020 188 aaKnown RBP13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 IL24Q13007 206 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 RTP5Q14D33 572 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 PLAC9Q5JTB6 97 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 GPR157Q5UAW9 335 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 ZNF552Q9H707 407 aaPredicted RBP13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 SEPSECSQ9HD40 501 aaKnown RBP13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 ZNF319Q9P2F9 582 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 RBM7Q9Y580 266 aaKnown RBP13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 KNTC1P50748 2209 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 AHCTF1Q8WYP5 2266 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 SDK2Q58EX2 2172 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 OR6A2O95222 327 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 PPBPP02775 128 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 DBHP09172 617 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 DPPA3Q6W0C5 159 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 FBXW12Q6X9E4 464 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 RNF144BQ7Z419 303 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 LHFPL1Q86WI0 220 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 SULF2Q8IWU5 870 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 NFAM1Q8NET5 270 aaPredicted RBP13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 ORAOV1Q8WV07 137 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 ARRDC1-AS1Q9H2J1 176 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 PLSCR2Q9NRY7 297 aa13.71□□□□□ -0.21
SEMA3B-214ENST00000619119 A0A0A6YYD4 124 aa13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 LOC101059948A0A1B0GTJ6 334 aa13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 SHISA8B8ZZ34 492 aa13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 P2RY10O00398 339 aa13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 SLC33A1O00400 549 aaPredicted RBP13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 GP1BBP13224 206 aa13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 HOXC12P31275 282 aa13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 SNU13P55769 128 aaKnown RBP13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 TMPRSS7Q7RTY8 843 aa13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 GRINAQ7Z429 371 aa13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 CALHM1Q8IU99 346 aa13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 OR52M1Q8NGK5 317 aa13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 RBKSQ9H477 322 aa13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 RNF115Q9Y4L5 304 aa13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 TNRC6BQ9UPQ9 1833 aaKnown RBP13.71□□□□□ -0.22
SEMA3B-214ENST00000619119 A0A1W2PP11 408 aa13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 H7BYZ3 331 aa13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 RENP00797 406 aa13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 PGCP20142 388 aa13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 RPS4XP62701 263 aaKnown RBP13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 ZNF709Q8N972 641 aa13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 ZNF665Q9H7R5 613 aa13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 MRPS28Q9Y2Q9 187 aaKnown RBP13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 CELA2AP08217 269 aa13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 SLC6A8P48029 635 aa13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 ACOT6Q3I5F7 207 aaPredicted RBP13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 ERASQ7Z444 233 aa13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 LYZL2Q7Z4W2 148 aa13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 TOMM40LQ969M1 308 aa13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 PLA2G3Q9NZ20 509 aa13.7□□□□□ -0.22
SEMA3B-214ENST00000619119 CDKN1AP38936 164 aa13.69□□□□□ -0.22
SEMA3B-214ENST00000619119 FAM3BP58499 235 aaPredicted RBP13.69□□□□□ -0.22
SEMA3B-214ENST00000619119 LDLRAD2Q5SZI1 272 aa13.69□□□□□ -0.22
SEMA3B-214ENST00000619119 OR5L2Q8NGL0 311 aa13.69□□□□□ -0.22
SEMA3B-214ENST00000619119 ARHGAP5-AS1Q96IT6 56 aa13.69□□□□□ -0.22
SEMA3B-214ENST00000619119 CTDSP1Q9GZU7 261 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms