RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 DNAAF3Q8N9W5 541 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 ZFP62Q8NB50 900 aaPredicted RBP1.29□□□□□ -2.2
TARDBP-220ENST00000618606 OR8J2Q8NGG1 315 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 OR4P4Q8NGL7 312 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 OR9A2Q8NGT5 310 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 OR52N1Q8NH53 320 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 ZNRF2Q8NHG8 242 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 STOML3Q8TAV4 291 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 SCGB1C1Q8TD33 95 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 CASTOR1Q8WTX7 329 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 C2orf15Q8WU43 125 aaKnown RBP1.29□□□□□ -2.2
TARDBP-220ENST00000618606 RBPMSQ93062 196 aaKnown RBP1.29□□□□□ -2.2
TARDBP-220ENST00000618606 MAL2Q969L2 176 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 CLDN23Q96B33 292 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 SMIM19Q96E16 107 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 PPP1R36Q96LQ0 422 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 OLFM3Q96PB7 478 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 DOK1Q99704 481 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 TMEM208Q9BTX3 173 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 CDCA4Q9BXL8 241 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 EBPLQ9BY08 206 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 API5Q9BZZ5 524 aaKnown RBP1.29□□□□□ -2.2
TARDBP-220ENST00000618606 MS4A6AQ9H2W1 248 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 COMMD9Q9P000 198 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 TAC3Q9UHF0 121 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 TP53TG1Q9Y2A0 90 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 ZNF835Q9Y2P0 537 aa1.29□□□□□ -2.2
TARDBP-220ENST00000618606 NUP153P49790 1475 aaKnown RBP1.29□□□□□ -2.2
TARDBP-220ENST00000618606 DAPL1A0PJW8 107 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 C7orf66A4D0T2 115 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 IZUMO1RA6ND01 250 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 CD300LBA8K4G0 201 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 COLCA2A8K830 154 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 C9JQL5 133 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 H0Y980 276 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 K7EPK0 472 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 SLC37A4O43826 429 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 OR7C2O60412 319 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 UGT2B11O75310 529 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 CRTAPO75718 401 aaPredicted RBP1.28□□□□□ -2.2
TARDBP-220ENST00000618606 NRASP01111 189 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 HRASP01112 189 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 KRASP01116 189 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 LHBP01229 141 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 TYMSP04818 313 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 SNRPAP09012 282 aaKnown RBP1.28□□□□□ -2.2
TARDBP-220ENST00000618606 OR5AC1P0C628 307 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 CISD3P0C7P0 127 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 HIST1H1CP16403 213 aaKnown RBP1.28□□□□□ -2.2
TARDBP-220ENST00000618606 AKR1C4P17516 323 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 ATF1P18846 271 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 CXCL2P19875 107 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 CXCL3P19876 107 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 RCVRNP35243 200 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 IFNGR2P38484 337 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 SULT1A2P50226 295 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 MP68P56378 58 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 DEFA6Q01524 100 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 BTN1A1Q13410 526 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 MED21Q13503 144 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 FAM53BQ14153 422 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 SLC36A2Q495M3 483 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 KRTAP13-2Q52LG2 175 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 TTMPQ5BVD1 217 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 MESTQ5EB52 335 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 CENPWQ5EE01 88 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 HES3Q5TGS1 186 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 ZNF880Q6PDB4 577 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 PRSS54Q6PEW0 395 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 TTC33Q6PID6 262 aaPredicted RBP1.28□□□□□ -2.2
TARDBP-220ENST00000618606 TBPL2Q6SJ96 375 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 SPNS3Q6ZMD2 512 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 OLIG3Q7RTU3 272 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 TMEM144Q7Z5S9 345 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 DAZ4Q86SG3 579 aaKnown RBP1.28□□□□□ -2.2
TARDBP-220ENST00000618606 SLC13A5Q86YT5 568 aaPredicted RBP1.28□□□□□ -2.2
TARDBP-220ENST00000618606 CPNE9Q8IYJ1 553 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 ZNF709Q8N972 641 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 OR8S1Q8NH09 359 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 PPWD1Q96BP3 646 aaKnown RBP1.28□□□□□ -2.2
TARDBP-220ENST00000618606 REEP6Q96HR9 211 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 C8orf76Q96K31 380 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 KCTD7Q96MP8 289 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 IP6K3Q96PC2 410 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 PEBP4Q96S96 227 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 THTPAQ9BU02 230 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 SPZ1Q9BXG8 430 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 CHST5Q9GZS9 411 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 ARL6Q9H0F7 186 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 METTL9Q9H1A3 318 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 FAM60AQ9NP50 221 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 DAZ1Q9NQZ3 744 aaKnown RBP1.28□□□□□ -2.2
TARDBP-220ENST00000618606 FAM206AQ9NX38 181 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 HMGXB4Q9UGU5 601 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 C14orf166Q9Y224 244 aaKnown RBP1.28□□□□□ -2.2
TARDBP-220ENST00000618606 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.28□□□□□ -2.2
TARDBP-220ENST00000618606 PTPRKQ15262 1439 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 RPRD2Q5VT52 1461 aaKnown RBP1.28□□□□□ -2.2
TARDBP-220ENST00000618606 MYO15BQ96JP2 1530 aa1.28□□□□□ -2.2
TARDBP-220ENST00000618606 PCM1Q15154 2024 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms