RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 OR52M1Q8NGK5 317 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 MOB3AQ96BX8 217 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 MSL2Q9HCI7 577 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 Q9N2K0 584 aa10.57□□□□□ -0.72
CIITA-212ENST00000618207 DEGS1O15121 323 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 SLC34A2O95436 690 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 GNRHRP30968 328 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 ECI1P42126 302 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 ZNF154Q13106 437 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 TMEM187Q14656 261 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 ZADH2Q8N4Q0 377 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 PARP12Q9H0J9 701 aaKnown RBP10.56□□□□□ -0.72
CIITA-212ENST00000618207 ESRP2Q9H6T0 727 aaKnown RBP10.56□□□□□ -0.72
CIITA-212ENST00000618207 GP6Q9HCN6 339 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 SESN1Q9Y6P5 492 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 PKDREJQ9NTG1 2253 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 IGKV1-6A0A0C4DH72 117 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 A6NLC8 198 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 WDR1O75083 606 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 NXPH2O95156 264 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 ASCL1P50553 236 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 PAN3Q58A45 887 aaKnown RBP10.56□□□□□ -0.72
CIITA-212ENST00000618207 TMEM268Q5VZI3 342 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 RPL7L1Q6DKI1 246 aaKnown RBP10.56□□□□□ -0.72
CIITA-212ENST00000618207 ZNF818PQ6ZRF7 136 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 GAPTQ8N292 157 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 KIRREL1Q96J84 757 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 SLC5A7Q9GZV3 580 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 OR51I2Q9H344 312 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 CCL28Q9NRJ3 127 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 MEMO1Q9Y316 297 aa10.56□□□□□ -0.72
CIITA-212ENST00000618207 USF3Q68DE3 2245 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 OR5B21A6NL26 309 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 ZNF891A8MT65 544 aaPredicted RBP10.55□□□□□ -0.72
CIITA-212ENST00000618207 WNT9BO14905 357 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 SMCO1Q147U7 214 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 BAP18Q8IXM2 172 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 SLC35G3Q8N808 338 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 OR1S2Q8NGQ3 325 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 KLF14Q8TD94 323 aaPredicted RBP10.55□□□□□ -0.72
CIITA-212ENST00000618207 CNTNAP3BQ96NU0 1288 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 SYT3Q9BQG1 590 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 CNTNAP3Q9BZ76 1288 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 DECR2Q9NUI1 292 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 LHX6Q9UPM6 363 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 UBE2J1Q9Y385 318 aaPredicted RBP10.55□□□□□ -0.72
CIITA-212ENST00000618207 NAPSAO96009 420 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 TPT1P13693 172 aaKnown RBP10.55□□□□□ -0.72
CIITA-212ENST00000618207 OR8G1Q15617 311 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 TBC1D26Q86UD7 250 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 RTL8AQ9BWD3 113 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 CYTL1Q9NRR1 136 aa10.55□□□□□ -0.72
CIITA-212ENST00000618207 TUBAL3A6NHL2 446 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 K7EPK0 472 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 AQP7O14520 342 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 MBPP02686 304 aaPredicted RBP10.54□□□□□ -0.72
CIITA-212ENST00000618207 PET100P0DJ07 73 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 RPL12P30050 165 aaKnown RBP10.54□□□□□ -0.72
CIITA-212ENST00000618207 IL15RAQ13261 267 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 ZNF169Q14929 603 aaPredicted RBP10.54□□□□□ -0.72
CIITA-212ENST00000618207 MPV17LQ2QL34 196 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 ACSF3Q4G176 576 aaPredicted RBP10.54□□□□□ -0.72
CIITA-212ENST00000618207 PRAMEF6Q5VXH4 476 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 IGFL2Q6UWQ7 119 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 FBXW12Q6X9E4 464 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 LIAT1Q6ZQX7 453 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 DPPA2Q7Z7J5 298 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 FAM71E2Q8N5Q1 922 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 OR51H1Q8NH63 302 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 BSCL2Q96G97 398 aaPredicted RBP10.54□□□□□ -0.72
CIITA-212ENST00000618207 SLC25A32Q9H2D1 315 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 OPA3Q9H6K4 179 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 PCDHB10Q9UN67 800 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 RBM7Q9Y580 266 aaKnown RBP10.54□□□□□ -0.72
CIITA-212ENST00000618207 DOCK11Q5JSL3 2073 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 TRBV6-7A0A0A0MS04 114 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 C3orf85A0A1B0GTC6 90 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 J3QT63 122 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 MPPED1O15442 326 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 APOC3P02656 99 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 CECR9P0C854 216 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 SAXO1Q8IYX7 474 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 BVESQ8NE79 360 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 Q8NFD4 153 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 MRPL30Q8TCC3 161 aaKnown RBP10.54□□□□□ -0.72
CIITA-212ENST00000618207 MSI2Q96DH6 328 aaKnown RBP10.54□□□□□ -0.72
CIITA-212ENST00000618207 OR1A1Q9P1Q5 309 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 DKK4Q9UBT3 224 aa10.54□□□□□ -0.72
CIITA-212ENST00000618207 PRR33A8MZF0 331 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 HSPA12AO43301 675 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 OR2H2O95918 312 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 HKR1P10072 659 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 IL24Q13007 206 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 FAM76BQ5HYJ3 339 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 VHLLQ6RSH7 139 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 WDR31Q8NA23 367 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 MAGT1Q9H0U3 335 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 RCC2Q9P258 522 aaKnown RBP10.53□□□□□ -0.72
CIITA-212ENST00000618207 SH3BGRL2Q9UJC5 107 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 ERRFI1Q9UJM3 462 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms