RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 C1QTNF6Q9BXI9 259 aa13.34□□□□□ -0.27
NR1H3-235ENST00000616973 TMEM222Q9H0R3 208 aa13.34□□□□□ -0.27
NR1H3-235ENST00000616973 PLEKHA2Q9HB19 425 aa13.34□□□□□ -0.27
NR1H3-235ENST00000616973 HES4Q9HCC6 221 aa13.34□□□□□ -0.27
NR1H3-235ENST00000616973 TMEM56-RWDD3S4R434 201 aa13.34□□□□□ -0.27
NR1H3-235ENST00000616973 SLC33A1O00400 549 aaPredicted RBP13.33□□□□□ -0.28
NR1H3-235ENST00000616973 CDIPTO14735 213 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 FGF16O43320 207 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 OR2H2O95918 312 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 EIF5AP63241 154 aaKnown RBP13.33□□□□□ -0.28
NR1H3-235ENST00000616973 MBNL2Q5VZF2 373 aaKnown RBP13.33□□□□□ -0.28
NR1H3-235ENST00000616973 LHFPL5Q8TAF8 219 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 SECTM1Q8WVN6 248 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 CXXC4Q9H2H0 198 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 IGKV1D-13A0A0B4J2D9 117 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 C1QTNF9BB2RNN3 333 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 KRBOX1C9JBD0 128 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 E5RGE8 158 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 H0YL77 283 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 SH2D1BO14796 132 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 MLNRO43193 412 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 NXPH2O95156 264 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 IGKV1-13P0DP09 117 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 ZNF324BQ6AW86 544 aaPredicted RBP13.33□□□□□ -0.28
NR1H3-235ENST00000616973 FIP1L1Q6UN15 594 aaKnown RBP13.33□□□□□ -0.28
NR1H3-235ENST00000616973 ZNF497Q6ZNH5 498 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 ZNF818PQ6ZRF7 136 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 C5orf24Q7Z6I8 188 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 TBC1D26Q86UD7 250 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 H1FOOQ8IZA3 346 aaPredicted RBP13.33□□□□□ -0.28
NR1H3-235ENST00000616973 SPERTQ8NA61 448 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 SNIP1Q8TAD8 396 aaKnown RBP13.33□□□□□ -0.28
NR1H3-235ENST00000616973 TLNRD1Q9H1K6 362 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 NSG2Q9Y328 171 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 SLC25A15Q9Y619 301 aa13.33□□□□□ -0.28
NR1H3-235ENST00000616973 URB1O60287 2271 aaKnown RBP13.33□□□□□ -0.28
NR1H3-235ENST00000616973 DMXL1Q9Y485 3027 aa13.32□□□□□ -0.28
NR1H3-235ENST00000616973 IGHV2OR16-5A0A0B4J2B6 119 aa13.32□□□□□ -0.28
NR1H3-235ENST00000616973 IGHV1-18A0A0C4DH31 117 aa13.32□□□□□ -0.28
NR1H3-235ENST00000616973 A0A1B0GWJ7 208 aa13.32□□□□□ -0.28
NR1H3-235ENST00000616973 DUXBA0A1W2PPF3 345 aa13.32□□□□□ -0.28
NR1H3-235ENST00000616973 K7EPK0 472 aa13.32□□□□□ -0.28
NR1H3-235ENST00000616973 MBPP02686 304 aaPredicted RBP13.32□□□□□ -0.28
NR1H3-235ENST00000616973 RPL12P30050 165 aaKnown RBP13.32□□□□□ -0.28
NR1H3-235ENST00000616973 ZNF718Q3SXZ3 478 aa13.32□□□□□ -0.28
NR1H3-235ENST00000616973 C1orf185Q5T7R7 199 aa13.32□□□□□ -0.28
NR1H3-235ENST00000616973 FOXRED2Q8IWF2 684 aa13.32□□□□□ -0.28
NR1H3-235ENST00000616973 FAM71E2Q8N5Q1 922 aa13.32□□□□□ -0.28
NR1H3-235ENST00000616973 TINAGQ9UJW2 476 aa13.32□□□□□ -0.28
NR1H3-235ENST00000616973 NUP50Q9UKX7 468 aa13.32□□□□□ -0.28
NR1H3-235ENST00000616973 OR2W1Q9Y3N9 320 aa13.32□□□□□ -0.28
NR1H3-235ENST00000616973 CDS2O95674 445 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 WNT2P09544 360 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 RCC1P18754 421 aaPredicted RBP13.31□□□□□ -0.28
NR1H3-235ENST00000616973 TIMP3P35625 211 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 C11orf53Q8IXP5 236 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 SLC35G3Q8N808 338 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 OR10J5Q8NHC4 309 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 PLPPR1Q8TBJ4 325 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 KIRREL1Q96J84 757 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 LSM5Q9Y4Y9 91 aaKnown RBP13.31□□□□□ -0.28
NR1H3-235ENST00000616973 FAM215AQ9Y5M1 114 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 C3orf80F5H4A9 247 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 SIRPB1O00241 398 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 CRYZL1O95825 349 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 GAPDHP04406 335 aaKnown RBP13.31□□□□□ -0.28
NR1H3-235ENST00000616973 GRPP07492 148 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 LMO1P25800 156 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 UCP1P25874 307 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 C3orf36Q3SXR2 165 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 KRTCAP3Q53RY4 240 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 TMEM268Q5VZI3 342 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 FAM219AQ8IW50 185 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 CMTM1Q8IZ96 169 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 OR4D5Q8NGN0 318 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 RNF141Q8WVD5 230 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 USB1Q9BQ65 265 aaKnown RBP13.31□□□□□ -0.28
NR1H3-235ENST00000616973 CCL28Q9NRJ3 127 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 MBNL3Q9NUK0 354 aaKnown RBP13.31□□□□□ -0.28
NR1H3-235ENST00000616973 WASF3Q9UPY6 502 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 UBE2J1Q9Y385 318 aaPredicted RBP13.31□□□□□ -0.28
NR1H3-235ENST00000616973 WIPI2Q9Y4P8 454 aa13.31□□□□□ -0.28
NR1H3-235ENST00000616973 HEATR1Q9H583 2144 aaKnown RBP13.31□□□□□ -0.28
NR1H3-235ENST00000616973 PROB1E7EW31 1015 aa13.3□□□□□ -0.28
NR1H3-235ENST00000616973 TIMM8AO60220 97 aaPredicted RBP13.3□□□□□ -0.28
NR1H3-235ENST00000616973 GLI4P10075 376 aa13.3□□□□□ -0.28
NR1H3-235ENST00000616973 GCH1P30793 250 aa13.3□□□□□ -0.28
NR1H3-235ENST00000616973 MEX3BQ6ZN04 569 aaKnown RBP13.3□□□□□ -0.28
NR1H3-235ENST00000616973 SELENOHQ8IZQ5 122 aaKnown RBP13.3□□□□□ -0.28
NR1H3-235ENST00000616973 IL22RA2Q969J5 263 aa13.3□□□□□ -0.28
NR1H3-235ENST00000616973 LINC00052Q96N35 136 aa13.3□□□□□ -0.28
NR1H3-235ENST00000616973 SPIN2AQ99865 258 aa13.3□□□□□ -0.28
NR1H3-235ENST00000616973 SPIN2BQ9BPZ2 258 aa13.3□□□□□ -0.28
NR1H3-235ENST00000616973 GLS2Q9UI32 602 aa13.3□□□□□ -0.28
NR1H3-235ENST00000616973 SSUH2Q9Y2M2 353 aa13.3□□□□□ -0.28
NR1H3-235ENST00000616973 PIGBOS1A0A0B4J2F0 54 aa13.29□□□□□ -0.28
NR1H3-235ENST00000616973 H0Y980 276 aa13.29□□□□□ -0.28
NR1H3-235ENST00000616973 K7EM74 188 aa13.29□□□□□ -0.28
NR1H3-235ENST00000616973 ST8SIA3O43173 380 aa13.29□□□□□ -0.28
NR1H3-235ENST00000616973 SCGB1D2O95969 90 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms