RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SUMF2Q8NBJ7 301 aa12.25□□□□□ -0.45
UBXN1-218ENST00000616865 RAB40AQ8WXH6 277 aa12.25□□□□□ -0.45
UBXN1-218ENST00000616865 S100A16Q96FQ6 103 aaKnown RBP12.25□□□□□ -0.45
UBXN1-218ENST00000616865 DPCDQ9BVM2 203 aaPredicted RBP12.25□□□□□ -0.45
UBXN1-218ENST00000616865 SSBP3Q9BWW4 388 aaPredicted RBP12.25□□□□□ -0.45
UBXN1-218ENST00000616865 FAM234AQ9H0X4 552 aa12.25□□□□□ -0.45
UBXN1-218ENST00000616865 PPA2Q9H2U2 334 aa12.25□□□□□ -0.45
UBXN1-218ENST00000616865 IFT22Q9H7X7 185 aa12.25□□□□□ -0.45
UBXN1-218ENST00000616865 PLEKHJ1Q9NW61 149 aa12.25□□□□□ -0.45
UBXN1-218ENST00000616865 ING3Q9NXR8 418 aa12.25□□□□□ -0.45
UBXN1-218ENST00000616865 MAB21L2Q9Y586 359 aa12.25□□□□□ -0.45
UBXN1-218ENST00000616865 A0A1B0GW55 424 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 K7N7A8 449 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 MGST3O14880 152 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 SOCS1O15524 211 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 HPGDSO60760 199 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 TK1P04183 234 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 DUX4L2P0CJ85 424 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 DUX4L3P0CJ86 424 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 DUX4L4P0CJ87 422 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 DUX4L5P0CJ88 424 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 DUX4L6P0CJ89 424 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 DUX4L7P0CJ90 424 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 AMY2BP19961 511 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 EDDM3BP56851 147 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 MRPS15P82914 257 aaKnown RBP12.24□□□□□ -0.45
UBXN1-218ENST00000616865 EDDM3AQ14507 147 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 SLC9A3R2Q15599 337 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 DUX4L9Q6RFH8 374 aaPredicted RBP12.24□□□□□ -0.45
UBXN1-218ENST00000616865 Q6ZTK2 550 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 CMTM4Q8IZR5 234 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 OR8H2Q8N162 312 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 FAM89BQ8N5H3 189 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 OR10R2Q8NGX6 335 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 RAB3CQ96E17 227 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 MS4A7Q9GZW8 240 aaPredicted RBP12.24□□□□□ -0.45
UBXN1-218ENST00000616865 CTSZQ9UBR2 303 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 DUX4Q9UBX2 424 aa12.24□□□□□ -0.45
UBXN1-218ENST00000616865 A0A075B6Q4 140 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 A0A0A6YYD4 124 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 TRAV24A0A0B4J272 114 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 TMEM82A0PJX8 343 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 UBE2QL1A1L167 161 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 GPR37O15354 613 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 APOA1P02647 267 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 GLAP06280 429 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 IGHV4-38-2P0DP08 117 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 LMO1P25800 156 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 S100A5P33763 92 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 TALDO1P37837 337 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 OR3A1P47881 315 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 KCNJ3P48549 501 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 ATXN7L3Q14CW9 347 aaPredicted RBP12.23□□□□□ -0.45
UBXN1-218ENST00000616865 ARL6IP1Q15041 203 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 CD276Q5ZPR3 534 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 WDR25Q64LD2 544 aaPredicted RBP12.23□□□□□ -0.45
UBXN1-218ENST00000616865 BRICD5Q6PL45 260 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 C17orf107Q6ZR85 190 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 C9orf139Q6ZV77 190 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 OR4S1Q8NGB4 309 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 TAF15Q92804 592 aaKnown RBP eCLIP12.23□□□□□ -0.45
UBXN1-218ENST00000616865 SLC25A38Q96DW6 304 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 CMTM3Q96MX0 182 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 SLIRPQ9GZT3 109 aaKnown RBP12.23□□□□□ -0.45
UBXN1-218ENST00000616865 ABCG5Q9H222 651 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 ETAA1Q9NY74 926 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 ZNF581Q9P0T4 197 aa12.23□□□□□ -0.45
UBXN1-218ENST00000616865 A0A0A6YYH2 397 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 A6NJ64 397 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 PSPNO60542 156 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 ZNF737O75373 536 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 ECDO95905 644 aaPredicted RBP12.22□□□□□ -0.45
UBXN1-218ENST00000616865 PPIAL4GP0DN37 164 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 MDKP21741 143 aaPredicted RBP12.22□□□□□ -0.45
UBXN1-218ENST00000616865 CHATP28329 748 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 PAX8Q06710 450 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 CNPY1Q3B7I2 92 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 KRBOX4Q5JUW0 171 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 C6orf201Q7Z4U5 140 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 ARHGAP5-AS1Q96IT6 56 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 FAAP24Q9BTP7 215 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 PECRQ9BY49 303 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 MMP27Q9H306 513 aa12.22□□□□□ -0.45
UBXN1-218ENST00000616865 CHMP1AQ9HD42 196 aaPredicted RBP12.22□□□□□ -0.45
UBXN1-218ENST00000616865 RCC2Q9P258 522 aaKnown RBP12.22□□□□□ -0.45
UBXN1-218ENST00000616865 TRAV18A0A075B6X5 111 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 IGHV3OR16-10A0A075B7F0 116 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 TRAV40A0A0B4J280 105 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 A0A1W2PQ09 198 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 CTDSP2O14595 271 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 EIF4EP06730 217 aaKnown RBP12.21□□□□□ -0.45
UBXN1-218ENST00000616865 CD3GP09693 182 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 ELK1P19419 428 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 CDK2P24941 298 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 MNDAP41218 407 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 PAX2Q02962 417 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 AESQ08117 197 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 ARFRP1Q13795 201 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 MOGAT2Q3SYC2 334 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 CDNFQ49AH0 187 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms