RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 MDFIC2A0A1B0GVS7 189 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A10PA6NDY2 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A18PA6NE21 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A16PA6NEW6 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A20PA6NIJ5 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A8PA6NJQ4 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A7PA6NKC0 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A22PA8MWA6 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A12PA8MX19 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A5PA8MXJ8 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A23PA8MXZ1 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 COX7A2P2O60397 106 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 NEURL1O76050 574 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 GYPAP02724 150 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A15PP0C7V4 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A13PP0C7W8 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A14PP0C7W9 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM90A24PP0C7X0 464 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 AESQ08117 197 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 ZNF596Q8TC21 504 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 MARS2Q96GW9 593 aaKnown RBP8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 ZNF488Q96MN9 340 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 CCL13Q99616 98 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 RASL11BQ9BPW5 248 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 NIPSNAP3BQ9BS92 247 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 LPAR2Q9HBW0 351 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 MSRB2Q9Y3D2 182 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 SIRT4Q9Y6E7 314 aaPredicted RBP8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 KLF4O43474 513 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 RAB4AP20338 218 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 GLRXP35754 106 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 LHX2P50458 406 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 ATP5J2P56134 94 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 CLDN18P56856 261 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 DHRS2Q13268 280 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 PPP1R1AQ13522 171 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 Q56UQ5 140 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 LINC01590Q5TEZ4 76 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAHD2BQ6P2I3 314 aaPredicted RBP8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 GLCCI1Q86VQ1 547 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 MUC15Q8N387 334 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAHD2AQ96GK7 314 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 RBM38Q9H0Z9 239 aaKnown RBP8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 LSM2Q9Y333 95 aaKnown RBP8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 RAMP1O60894 148 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 THY1P04216 161 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 APOBEC3AP31941 199 aaPredicted RBP8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 UBE2G1P62253 170 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM27E3Q08E93 113 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 KCNRGQ8N5I3 272 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 BMPERQ8N8U9 685 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 SNX22Q96L94 193 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 ZNF714Q96N38 554 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 PPYP01298 95 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 OR10J4P0C629 311 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 PDLIM4P50479 330 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 SNAI3Q3KNW1 292 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 TMEM65Q6PI78 240 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 LINC00114Q6XXX2 140 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 GCSAMQ8N6F7 178 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 C15orf54Q8N8G6 183 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 HSD17B10Q99714 261 aaKnown RBP8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 CACNG5Q9UF02 275 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 OR2W1Q9Y3N9 320 aa8.17□□□□□ -1.1
CLTCL1-208ENST00000615606 C9orf170A2RU37 121 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 RAB19A4D1S5 217 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 OR5AC1P0C628 307 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 AVPI1Q5T686 147 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 SAXO1Q8IYX7 474 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 PCGF1Q9BSM1 259 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 SOX7Q9BT81 388 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 NUDT19A8MXV4 375 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 H3BP45 60 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 OR7C2O60412 319 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 DUS4LO95620 317 aaKnown RBP8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 DAOP14920 347 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 FGF7P21781 194 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 TNXAQ16473 311 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 PXDC1Q5TGL8 231 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 ABLIM2Q6H8Q1 611 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 FDX2Q6P4F2 183 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 C9orf106Q8NAJ2 232 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 OR2T6Q8NHC8 308 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 FBLIM1Q8WUP2 373 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 NTNG2Q96CW9 530 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 R3HDM4Q96D70 268 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 MISP3Q96FF7 219 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 BTF3L4Q96K17 158 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 ZNF426Q9BUY5 554 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 DEPPQ9NTK1 212 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 LOC390937A0A1W2PQ73 354 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 OPRK1P41145 380 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 TMEM267Q0VDI3 215 aaPredicted RBP8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 RNASE6Q93091 150 aaKnown RBP8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 MS4A7Q9GZW8 240 aaPredicted RBP8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 ZNF629Q9UEG4 869 aaPredicted RBP8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 MIOXQ9UGB7 285 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 TSC2P49815 1807 aa8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 ARHGEF17Q96PE2 2063 aaPredicted RBP8.16□□□□□ -1.1
CLTCL1-208ENST00000615606 CT45A10P0DMU9 189 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms