RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 CD59P13987 128 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PTGER4P35408 488 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 APLNRP35414 380 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SOX8P57073 446 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 GPR157Q5UAW9 335 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SGPP2Q8IWX5 399 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 LRRC18Q8N456 261 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ZNF610Q8N9Z0 462 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 OR11L1Q8NGX0 322 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FOXB1Q99853 325 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 METTL9Q9H1A3 318 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PLEKHJ1Q9NW61 149 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 H3BQ15 152 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ST8SIA5O15466 376 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 F10P00742 488 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FUT6P51993 359 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PSG4Q00888 419 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 LCN15Q6UWW0 184 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 BTNL8Q6UX41 500 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 CYB561D1Q8N8Q1 229 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 Q8WTZ3 238 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ZNF837Q96EG3 531 aaPredicted RBP9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 TUBA4BQ9H853 241 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 TMEM100Q9NV29 134 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PLA2G3Q9NZ20 509 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 TREM2Q9NZC2 230 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ZNF318Q5VUA4 2279 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 TNRC6AQ8NDV7 1962 aaKnown RBP9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM230AA0A1W2PPH8 454 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FCGR2AP12318 317 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 DDTP30046 118 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SULT1A2P50226 295 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 CLDN18P56856 261 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RPS16P62249 146 aaKnown RBP9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 DLK1P80370 383 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SPEM2Q0P670 501 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 OR2M7Q8NG81 312 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 WFDC1Q9HC57 220 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 GP6Q9HCN6 339 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 AURKAIP1Q9NWT8 199 aaPredicted RBP9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 GNG13Q9P2W3 67 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 DMRT1Q9Y5R6 373 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 BDP1A6H8Y1 2624 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 WDFY4Q6ZS81 3184 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SMCO3A2RU48 225 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ZNF587BE7ETH6 402 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 CD5P06127 495 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAHP16930 419 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HTR5AP47898 357 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PIGPP57054 158 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM3AP98173 230 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 OR8G1Q15617 311 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SMIM8Q96KF7 97 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SLC35B3Q9H1N7 401 aa9.36□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HEXAP06865 529 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 CTSDP07339 412 aaPredicted RBP9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 OR5AC1P0C628 307 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SNCAP37840 140 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 UCP3P55916 312 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ERVFRD-1P60508 538 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 YRDCQ86U90 279 aaKnown RBP9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 OR52M1Q8NGK5 317 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 OPA3Q9H6K4 179 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SEBOXQ9HB31 216 aaPredicted RBP9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 B4GALT7Q9UBV7 327 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 CHD3Q12873 2000 aaKnown RBP9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FRYLO94915 3013 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 NCOA6Q14686 2063 aaPredicted RBP9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PINLYPA6NC86 204 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 NUDT19A8MXV4 375 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PHF1O43189 567 aaPredicted RBP9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SPRY1O43609 319 aaPredicted RBP9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 CXCL13O43927 109 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 JTBO76095 146 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ZNF32P17041 273 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 OTX2P32243 289 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RBP2P50120 134 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 LRTM2Q8N967 370 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 AK3Q9UIJ7 227 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 A0A0U1RQK1 487 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 CD33P20138 364 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ZNF429Q86V71 674 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 TMEM37Q8WXS4 190 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SAT2Q96F10 170 aaPredicted RBP9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PACRGQ96M98 296 aaPredicted RBP9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 AQP10Q96PS8 301 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAAP24Q9BTP7 215 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PBDC1Q9BVG4 233 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PLSCR2Q9NRY7 297 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ABI3Q9P2A4 366 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FRYQ5TBA9 3013 aa9.35□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 IGKV1-27A0A075B6S5 117 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 M0R296 226 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HIST1H2BKO60814 126 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HIST1H2BJP06899 126 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 DBHP09172 617 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 TRGC1P0CF51 173 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HIST1H2BOP23527 126 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HIST1H2BBP33778 126 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HIST1H2BDP58876 126 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms