RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 IL15RAQ13261 267 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 ARFRP1Q13795 201 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 KDF1Q8NAX2 398 aaPredicted RBP14.22□□□□□ -0.13
CNOT3-208ENST00000613073 FRZBQ92765 325 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 ARHGAP5-AS1Q96IT6 56 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 SNX22Q96L94 193 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 FER1L6-AS2Q96M78 137 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 PRRG4Q9BZD6 226 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 A0A096LPE4 126 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 A0A1W2PPZ6 126 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 RAD51DO75771 328 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 SP1P08047 785 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 APLNRP35414 380 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 OR3A2P47893 321 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 SRSF6Q13247 344 aaKnown RBP14.22□□□□□ -0.13
CNOT3-208ENST00000613073 OR51T1Q8NGJ9 327 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 PBDC1Q9BVG4 233 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 MRPL37Q9BZE1 423 aaKnown RBP14.22□□□□□ -0.13
CNOT3-208ENST00000613073 OR2H1Q9GZK4 316 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 WNT5BQ9H1J7 359 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 SLC7A10Q9NS82 523 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 FBLN5Q9UBX5 448 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 FOXG1P55316 489 aaPredicted RBP14.22□□□□□ -0.13
CNOT3-208ENST00000613073 GGNBP1Q5YKI7 109 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.22□□□□□ -0.13
CNOT3-208ENST00000613073 VASH2Q86V25 355 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 PP6455Q8WZ26 134 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 ABHD14AQ9BUJ0 271 aa14.22□□□□□ -0.13
CNOT3-208ENST00000613073 RIF1Q5UIP0 2472 aaKnown RBP14.21□□□□□ -0.13
CNOT3-208ENST00000613073 SMCO3A2RU48 225 aa14.21□□□□□ -0.13
CNOT3-208ENST00000613073 ZNF705GA8MUZ8 300 aaPredicted RBP14.21□□□□□ -0.13
CNOT3-208ENST00000613073 CDRT15L2A8MXV6 281 aa14.21□□□□□ -0.13
CNOT3-208ENST00000613073 RBMXP38159 391 aaKnown RBP14.21□□□□□ -0.13
CNOT3-208ENST00000613073 TMPRSS7Q7RTY8 843 aa14.21□□□□□ -0.13
CNOT3-208ENST00000613073 MRPL24Q96A35 216 aaKnown RBP14.21□□□□□ -0.13
CNOT3-208ENST00000613073 SPOCK3Q9BQ16 436 aa14.21□□□□□ -0.13
CNOT3-208ENST00000613073 DEFB127Q9H1M4 99 aa14.21□□□□□ -0.13
CNOT3-208ENST00000613073 EHFQ9NZC4 300 aa14.21□□□□□ -0.13
CNOT3-208ENST00000613073 FAM230AA0A1W2PPH8 454 aa14.21□□□□□ -0.14
CNOT3-208ENST00000613073 IFNA10P01566 189 aa14.21□□□□□ -0.14
CNOT3-208ENST00000613073 GAPDHP04406 335 aaKnown RBP14.21□□□□□ -0.14
CNOT3-208ENST00000613073 CHRM2P08172 466 aa14.21□□□□□ -0.14
CNOT3-208ENST00000613073 PTGER4P35408 488 aa14.21□□□□□ -0.14
CNOT3-208ENST00000613073 DLK1P80370 383 aa14.21□□□□□ -0.14
CNOT3-208ENST00000613073 RELQ04864 619 aaPredicted RBP14.21□□□□□ -0.14
CNOT3-208ENST00000613073 RIPPLY2Q5TAB7 128 aa14.21□□□□□ -0.14
CNOT3-208ENST00000613073 C17orf78Q8N4C9 275 aa14.21□□□□□ -0.14
CNOT3-208ENST00000613073 ABHD5Q8WTS1 349 aa14.21□□□□□ -0.14
CNOT3-208ENST00000613073 LIPGQ9Y5X9 500 aa14.21□□□□□ -0.14
CNOT3-208ENST00000613073 OR6C6A6NF89 314 aa14.2□□□□□ -0.14
CNOT3-208ENST00000613073 GEMIN2O14893 280 aaKnown RBP14.2□□□□□ -0.14
CNOT3-208ENST00000613073 SYNGR4O95473 234 aa14.2□□□□□ -0.14
CNOT3-208ENST00000613073 HIST1H1DP16402 221 aaKnown RBP14.2□□□□□ -0.14
CNOT3-208ENST00000613073 FPR2P25090 351 aa14.2□□□□□ -0.14
CNOT3-208ENST00000613073 NUTF2P61970 127 aaKnown RBP14.2□□□□□ -0.14
CNOT3-208ENST00000613073 AADACL3Q5VUY0 350 aa14.2□□□□□ -0.14
CNOT3-208ENST00000613073 ARL6IP6Q8N6S5 226 aa14.2□□□□□ -0.14
CNOT3-208ENST00000613073 TP53TG5Q9Y2B4 290 aa14.2□□□□□ -0.14
CNOT3-208ENST00000613073 ANGPTL7O43827 346 aa14.2□□□□□ -0.14
CNOT3-208ENST00000613073 DEDDO75618 318 aa14.2□□□□□ -0.14
CNOT3-208ENST00000613073 SCGNO76038 276 aa14.2□□□□□ -0.14
CNOT3-208ENST00000613073 RPS2P15880 293 aaKnown RBP14.2□□□□□ -0.14
CNOT3-208ENST00000613073 CCNOP22674 350 aa14.2□□□□□ -0.14
CNOT3-208ENST00000613073 MTCP1P56278 107 aa14.2□□□□□ -0.14
CNOT3-208ENST00000613073 ARF1P84077 181 aaKnown RBP14.2□□□□□ -0.14
CNOT3-208ENST00000613073 HAS2Q92819 552 aa14.2□□□□□ -0.14
CNOT3-208ENST00000613073 HIST1H2BLQ99880 126 aa14.2□□□□□ -0.14
CNOT3-208ENST00000613073 URM1Q9BTM9 101 aaKnown RBP14.2□□□□□ -0.14
CNOT3-208ENST00000613073 ZNF318Q5VUA4 2279 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 ZNF205O95201 554 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 PTBP3O95758 552 aaKnown RBP14.19□□□□□ -0.14
CNOT3-208ENST00000613073 SFTPCP11686 197 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 MAS1LP35410 378 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 SP6Q3SY56 376 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 ZNF664Q8N3J9 261 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 CPEB3Q8NE35 698 aaKnown RBP14.19□□□□□ -0.14
CNOT3-208ENST00000613073 CSNK2A3Q8NEV1 391 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 BCO1Q9HAY6 547 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.19□□□□□ -0.14
CNOT3-208ENST00000613073 ZFHX2Q9C0A1 2572 aaPredicted RBP14.19□□□□□ -0.14
CNOT3-208ENST00000613073 SCAF4O95104 1147 aaKnown RBP14.19□□□□□ -0.14
CNOT3-208ENST00000613073 FTH1P19P0C7X4 201 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 PGA5P0DJD9 388 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 TMEM225BP0DP42 221 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 CCL2P13500 99 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 ARG2P78540 354 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 NHLH2Q02577 135 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 P4HA3Q7Z4N8 544 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 COMMD1Q8N668 190 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 MDS2Q8NDY4 140 aa14.19□□□□□ -0.14
CNOT3-208ENST00000613073 MCTS1Q9ULC4 181 aaKnown RBP14.19□□□□□ -0.14
CNOT3-208ENST00000613073 KLF13Q9Y2Y9 288 aaPredicted RBP14.19□□□□□ -0.14
CNOT3-208ENST00000613073 ZNF724A8MTY0 619 aa14.18□□□□□ -0.14
CNOT3-208ENST00000613073 KLRC4-KLRK1H3BQV0 150 aa14.18□□□□□ -0.14
CNOT3-208ENST00000613073 SPRY1O43609 319 aaPredicted RBP14.18□□□□□ -0.14
CNOT3-208ENST00000613073 TBPP20226 339 aa14.18□□□□□ -0.14
CNOT3-208ENST00000613073 BLVRBP30043 206 aaPredicted RBP14.18□□□□□ -0.14
CNOT3-208ENST00000613073 ZNF92Q03936 586 aa14.18□□□□□ -0.14
CNOT3-208ENST00000613073 PIP4P1Q86T03 277 aa14.18□□□□□ -0.14
CNOT3-208ENST00000613073 A8MWP6 167 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms