RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SLC22A20A6NK97 555 aa12.58□□□□□ -0.39
CDH1-213ENST00000612417 PHF1O43189 567 aaPredicted RBP12.58□□□□□ -0.39
CDH1-213ENST00000612417 CDS2O95674 445 aa12.58□□□□□ -0.39
CDH1-213ENST00000612417 NAPSAO96009 420 aa12.58□□□□□ -0.39
CDH1-213ENST00000612417 OR8U9P0C7N5 309 aa12.58□□□□□ -0.39
CDH1-213ENST00000612417 CD80P33681 288 aa12.58□□□□□ -0.39
CDH1-213ENST00000612417 RND3P61587 244 aa12.58□□□□□ -0.39
CDH1-213ENST00000612417 ARF1P84077 181 aaKnown RBP12.58□□□□□ -0.39
CDH1-213ENST00000612417 OR56B2PQ8NGI1 322 aa12.58□□□□□ -0.39
CDH1-213ENST00000612417 OR8U1Q8NH10 309 aa12.58□□□□□ -0.39
CDH1-213ENST00000612417 KIRREL1Q96J84 757 aa12.58□□□□□ -0.39
CDH1-213ENST00000612417 TP53RKQ96S44 253 aa12.58□□□□□ -0.39
CDH1-213ENST00000612417 MED12LQ86YW9 2145 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 DOCK7Q96N67 2140 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 DMXL2Q8TDJ6 3036 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 BOD1L1Q8NFC6 3051 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 ZNF724A8MTY0 619 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 MPPED1O15442 326 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 SS18L1O75177 396 aaPredicted RBP12.58□□□□□ -0.4
CDH1-213ENST00000612417 KCNJ3P48549 501 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 RAB5CP51148 216 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 FGF12P61328 243 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 PDCD1Q15116 288 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 HMGN3Q15651 99 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 C9orf135Q5VTT2 229 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 P4HA3Q7Z4N8 544 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 SLC35G3Q8N808 338 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 DMBX1Q8NFW5 382 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 HPSE2Q8WWQ2 592 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 EXTL1Q92935 676 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 BSCL2Q96G97 398 aaPredicted RBP12.58□□□□□ -0.4
CDH1-213ENST00000612417 PAPOLGQ9BWT3 736 aaKnown RBP12.58□□□□□ -0.4
CDH1-213ENST00000612417 TMEM222Q9H0R3 208 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 C11orf1Q9H5F2 150 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 WFDC1Q9HC57 220 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 MLXQ9UH92 298 aa12.58□□□□□ -0.4
CDH1-213ENST00000612417 C3orf85A0A1B0GTC6 90 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 C9JQL5 133 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 ZNHIT1O43257 154 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 IGHG3P01860 377 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 PAX6P26367 422 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 PRDX4Q13162 271 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 CEACAM21Q3KPI0 293 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 FAM76BQ5HYJ3 339 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 ZNF565Q8N9K5 539 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 APH1AQ96BI3 265 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 TMEM56Q96MV1 263 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 FGF23Q9GZV9 251 aaPredicted RBP12.57□□□□□ -0.4
CDH1-213ENST00000612417 Q9N2K0 584 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 LUZP4Q9P127 313 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 RCL1Q9Y2P8 373 aaKnown RBP12.57□□□□□ -0.4
CDH1-213ENST00000612417 KPTNQ9Y664 436 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 TMEM56-RWDD3S4R434 201 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 ARHGAP21Q5T5U3 1957 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 DLL1O00548 723 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 BCL3P20749 454 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 LMO1P25800 156 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 GNRHRP30968 328 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 SNCAP37840 140 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 ID4P47928 161 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 MPV17LQ2QL34 196 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 APOBEC3DQ96AK3 386 aaPredicted RBP12.57□□□□□ -0.4
CDH1-213ENST00000612417 SCRT1Q9BWW7 348 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 C12orf49Q9H741 205 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 RNF122Q9H9V4 155 aa12.57□□□□□ -0.4
CDH1-213ENST00000612417 TRDCB7Z8K6 153 aa12.56□□□□□ -0.4
CDH1-213ENST00000612417 AGPAT2O15120 278 aa12.56□□□□□ -0.4
CDH1-213ENST00000612417 WISP2O76076 250 aa12.56□□□□□ -0.4
CDH1-213ENST00000612417 TSPAN15O95858 294 aa12.56□□□□□ -0.4
CDH1-213ENST00000612417 GLI4P10075 376 aa12.56□□□□□ -0.4
CDH1-213ENST00000612417 ALKBH2Q6NS38 261 aa12.56□□□□□ -0.4
CDH1-213ENST00000612417 IGFL3Q6UXB1 125 aa12.56□□□□□ -0.4
CDH1-213ENST00000612417 NUFIP2Q7Z417 695 aaKnown RBP12.56□□□□□ -0.4
CDH1-213ENST00000612417 DPPA2Q7Z7J5 298 aa12.56□□□□□ -0.4
CDH1-213ENST00000612417 ZDHHC23Q8IYP9 409 aa12.56□□□□□ -0.4
CDH1-213ENST00000612417 KDF1Q8NAX2 398 aaPredicted RBP12.56□□□□□ -0.4
CDH1-213ENST00000612417 BOD1Q96IK1 185 aa12.56□□□□□ -0.4
CDH1-213ENST00000612417 ABHD14BQ96IU4 210 aa12.56□□□□□ -0.4
CDH1-213ENST00000612417 COA4Q9NYJ1 87 aa12.56□□□□□ -0.4
CDH1-213ENST00000612417 STRAPQ9Y3F4 350 aaKnown RBP12.56□□□□□ -0.4
CDH1-213ENST00000612417 GTF3C1Q12789 2109 aa12.56□□□□□ -0.4
CDH1-213ENST00000612417 TRAV20A0A0B4J274 112 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 DUXBA0A1W2PPF3 345 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 TK1P04183 234 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 SELLP14151 372 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 MEOX2P50222 304 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 GNMTQ14749 295 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 MIDNQ504T8 468 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 CLEC9AQ6UXN8 241 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 GTF3AQ92664 365 aaKnown RBP12.55□□□□□ -0.4
CDH1-213ENST00000612417 SLAMF9Q96A28 289 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 SAV1Q9H4B6 383 aaPredicted RBP12.55□□□□□ -0.4
CDH1-213ENST00000612417 OPA3Q9H6K4 179 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 CACFD1Q9UGQ2 172 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 ANKRD11Q6UB99 2663 aaPredicted RBP12.55□□□□□ -0.4
CDH1-213ENST00000612417 SPTBN4Q9H254 2564 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 C5orf49A4QMS7 147 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 TUSC2O75896 110 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 NFYBP25208 207 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 EIF2S3P41091 472 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms