RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 Q8TCH9 128 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 TNFAIP8L1Q8WVP5 186 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 ST8SIA4Q92187 359 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 ARHGAP5-AS1Q96IT6 56 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 MICU1Q9BPX6 476 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 TMEM106BQ9NUM4 274 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 TREM2Q9NZC2 230 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 IGHV4-61A0A0C4DH41 118 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 ANKRD34BA5PLL1 514 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 A6NJY4 79 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 LRRC30A6NM36 301 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 MCRIP1C9JLW8 97 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 TMEM178BH3BS89 294 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 TSC22D2O75157 780 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 SLC22A5O76082 557 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 SIX6O95475 246 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 MPC2O95563 127 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 IRF2P14316 349 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 HLA-GP17693 338 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 CXCL2P19875 107 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 C4BPBP20851 252 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 NFYAP23511 347 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-217ENST00000611848 UBE2MP61081 183 aaKnown RBP7.41□□□□□ -1.22
SMAD4-217ENST00000611848 PRDX4Q13162 271 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 DHRS2Q13268 280 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 CNN3Q15417 329 aaKnown RBP7.41□□□□□ -1.22
SMAD4-217ENST00000611848 MICBQ29980 383 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 TMEM249Q2WGJ8 235 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 LY6G6FQ5SQ64 297 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 DCAF12L2Q5VW00 463 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 TMED4Q7Z7H5 227 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 MOGAT3Q86VF5 341 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 LURAP1LQ8IV03 231 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 ZDHHC23Q8IYP9 409 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 C1orf87Q8N0U7 546 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 ARRDC1Q8N5I2 433 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 MAPK1IP1LQ8NDC0 245 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 OR5D18Q8NGL1 313 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 OR11L1Q8NGX0 322 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 PIGCQ92535 297 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 CPNE2Q96FN4 548 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-217ENST00000611848 HIST1H2AAQ96QV6 131 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 PECRQ9BY49 303 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 FN3KRPQ9HA64 309 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 GPR173Q9NS66 373 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 WIPI2Q9Y4P8 454 aa7.41□□□□□ -1.22
SMAD4-217ENST00000611848 SONP18583 2426 aaKnown RBP7.4□□□□□ -1.22
SMAD4-217ENST00000611848 TMEM210A6NLX4 147 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 OR2AT4A6NND4 320 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 ZNF850A8MQ14 1090 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 SERPINE3A8MV23 424 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 PMP2P02689 132 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 IFNA6P05013 189 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 CSN2P05814 226 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 HEXAP06865 529 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 CPT2P23786 658 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 MTCP1P56278 107 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 SEC61A1P61619 476 aaKnown RBP7.4□□□□□ -1.22
SMAD4-217ENST00000611848 OPCMLQ14982 345 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 GRK1Q15835 563 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 FAM76BQ5HYJ3 339 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 DMRTC1Q5HYR2 192 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 PRAMEF6Q5VXH4 476 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 LPCAT3Q6P1A2 487 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 LHFPL2Q6ZUX7 228 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 LYG2Q86SG7 212 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 TERB2Q8NHR7 220 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 NPRL2Q8WTW4 380 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 MITD1Q8WV92 249 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 OR5P3Q8WZ94 311 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 Q96M66 194 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 S100A13Q99584 98 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 RTL8AQ9BWD3 113 aa7.4□□□□□ -1.22
SMAD4-217ENST00000611848 ABCA2Q9BZC7 2435 aa7.4□□□□□ -1.23
SMAD4-217ENST00000611848 IGKV1-27A0A075B6S5 117 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 IGHV3-64DA0A0J9YX35 117 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 C9orf170A2RU37 121 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 LRP5LA4QPB2 252 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 FSTL3O95633 263 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 NRASP01111 189 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 IFNA7P01567 189 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 GRPP07492 148 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 SERPINA2P20848 420 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 BLVRBP30043 206 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-217ENST00000611848 PMELP40967 661 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 RBP2P50120 134 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 FUT6P51993 359 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 PPP1R1AQ13522 171 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 CEACAM21Q3KPI0 293 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 AVPI1Q5T686 147 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 CYB5R2Q6BCY4 276 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 CLEC9AQ6UXN8 241 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 C17orf107Q6ZR85 190 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 LHFPL1Q86WI0 220 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 OR5A2Q8NGI9 324 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 OR5M8Q8NGP6 311 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 OR10K1Q8NGX5 313 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 CLDND2Q8NHS1 167 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 TECTBQ96PL2 329 aa7.39□□□□□ -1.23
SMAD4-217ENST00000611848 DPCDQ9BVM2 203 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms