RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 TMED3Q9Y3Q3 217 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 RAB5CP51148 216 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 STRAPQ9Y3F4 350 aaKnown RBP17.54■□□□□ 0.4
SSBP3-216ENST00000610401 SRP19P09132 144 aaKnown RBP17.54■□□□□ 0.4
SSBP3-216ENST00000610401 OTX1P32242 354 aaPredicted RBP17.54■□□□□ 0.4
SSBP3-216ENST00000610401 LHFPL2Q6ZUX7 228 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 ZNF100Q8IYN0 542 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 SELENOHQ8IZQ5 122 aaKnown RBP17.54■□□□□ 0.4
SSBP3-216ENST00000610401 TAAR9Q96RI9 348 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 WNT5BQ9H1J7 359 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 PLEKHF2Q9H8W4 249 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 SYNGR1O43759 233 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 HIST1H2BKO60814 126 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 NGFP01138 241 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 HIST1H2BJP06899 126 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 HIST1H2BOP23527 126 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 HIST1H2BBP33778 126 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 HIST1H2BDP58876 126 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 HIST1H2BCP62807 126 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 NKX6-1P78426 367 aaPredicted RBP17.53■□□□□ 0.4
SSBP3-216ENST00000610401 ZXDAP98168 799 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 ICAM4Q14773 271 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 RAB35Q15286 201 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 TESK1Q15569 626 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 HIST2H2BEQ16778 126 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.53■□□□□ 0.4
SSBP3-216ENST00000610401 C10orf128Q5T292 105 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 C20orf204Q6ZNR8 217 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 ZNF610Q8N9Z0 462 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 ADPRHL1Q8NDY3 354 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 HIST1H2BHQ93079 126 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 INTS12Q96CB8 462 aaKnown RBP17.53■□□□□ 0.4
SSBP3-216ENST00000610401 HIST1H2BNQ99877 126 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 HIST1H2BMQ99879 126 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 TMEM38BQ9NVV0 291 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 SCAF4O95104 1147 aaKnown RBP17.53■□□□□ 0.4
SSBP3-216ENST00000610401 CRYGSP22914 178 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 HERPUD1Q15011 391 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 RTL6Q6ICC9 239 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 OR10D3Q8NH80 312 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 ARV1Q9H2C2 271 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 PLA2G3Q9NZ20 509 aa17.53■□□□□ 0.4
SSBP3-216ENST00000610401 FOXD3Q9UJU5 478 aaPredicted RBP17.53■□□□□ 0.4
SSBP3-216ENST00000610401 PATE3B3GLJ2 98 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 SELEP16581 610 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 DTYMKP23919 212 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 CTSSP25774 331 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 MEGF10Q96KG7 1140 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 PLK3Q9H4B4 646 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 AURKAIP1Q9NWT8 199 aaPredicted RBP17.52■□□□□ 0.4
SSBP3-216ENST00000610401 LRFN1Q9P244 771 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 ERRFI1Q9UJM3 462 aaPredicted RBP17.52■□□□□ 0.4
SSBP3-216ENST00000610401 KCNS2Q9ULS6 477 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 USF3Q68DE3 2245 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 SMG1Q96Q15 3661 aaKnown RBP17.52■□□□□ 0.4
SSBP3-216ENST00000610401 UMODP07911 640 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 RNF224P0DH78 156 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 PSG2P11465 335 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 DSCR4P56555 118 aaPredicted RBP17.52■□□□□ 0.4
SSBP3-216ENST00000610401 GAMTQ14353 236 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 LPAL2Q16609 132 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 OR8G2PQ6IF36 304 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 CCDC54Q8NEL0 328 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 CADM4Q8NFZ8 388 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 WFIKKN1Q96NZ8 548 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 SMOC1Q9H4F8 434 aa17.52■□□□□ 0.4
SSBP3-216ENST00000610401 CACNA1GO43497 2377 aa17.52■□□□□ 0.39
SSBP3-216ENST00000610401 SLC22A20A6NK97 555 aa17.52■□□□□ 0.39
SSBP3-216ENST00000610401 PGA5P0DJD9 388 aa17.52■□□□□ 0.39
SSBP3-216ENST00000610401 NR2C1P13056 603 aa17.52■□□□□ 0.39
SSBP3-216ENST00000610401 C3AR1Q16581 482 aa17.52■□□□□ 0.39
SSBP3-216ENST00000610401 TCEAL7Q9BRU2 100 aa17.52■□□□□ 0.39
SSBP3-216ENST00000610401 OR2H1Q9GZK4 316 aa17.52■□□□□ 0.39
SSBP3-216ENST00000610401 ZNF732B4DXR9 585 aa17.51■□□□□ 0.39
SSBP3-216ENST00000610401 ETV2O00321 342 aaPredicted RBP17.51■□□□□ 0.39
SSBP3-216ENST00000610401 LILRA1O75019 489 aa17.51■□□□□ 0.39
SSBP3-216ENST00000610401 CD55P08174 381 aa17.51■□□□□ 0.39
SSBP3-216ENST00000610401 DEFA6Q01524 100 aa17.51■□□□□ 0.39
SSBP3-216ENST00000610401 CEBPZOSA8MTT3 80 aa17.51■□□□□ 0.39
SSBP3-216ENST00000610401 SERPINE2P07093 398 aa17.51■□□□□ 0.39
SSBP3-216ENST00000610401 GDF1P27539 372 aa17.51■□□□□ 0.39
SSBP3-216ENST00000610401 SPINK9Q5DT21 86 aa17.51■□□□□ 0.39
SSBP3-216ENST00000610401 ODF3L1Q8IXM7 274 aa17.51■□□□□ 0.39
SSBP3-216ENST00000610401 FRZBQ92765 325 aa17.51■□□□□ 0.39
SSBP3-216ENST00000610401 EXPH5Q8NEV8 1989 aa17.51■□□□□ 0.39
SSBP3-216ENST00000610401 WDR1O75083 606 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 FUT6P51993 359 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 FAM53AQ6NSI3 398 aaPredicted RBP17.5■□□□□ 0.39
SSBP3-216ENST00000610401 KMT5CQ86Y97 462 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 UFSP2Q9NUQ7 469 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 PPP1R2P9O14990 202 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 TRGC1P0CF51 173 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 HOXB1P14653 301 aaPredicted RBP17.5■□□□□ 0.39
SSBP3-216ENST00000610401 CD200P41217 278 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 SPANXN5Q5MJ07 72 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 LRP11Q86VZ4 500 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 HLA-CQ95604 372 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 ANGPTL4Q9BY76 406 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 RPRMQ9NS64 109 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 IGKV1-6A0A0C4DH72 117 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms