RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 REG1BP48304 166 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 RASSF2P50749 326 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 DIAPH2-AS1Q14236 149 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 CDK5R1Q15078 307 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 ZIK1Q3SY52 487 aaPredicted RBP11.75□□□□□ -0.53
CTSA-216ENST00000607212 FDX2Q6P4F2 183 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 LHFPL3Q86UP9 236 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 STPG2Q8N412 459 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 COMMD1Q8N668 190 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 ACBD7Q8N6N7 88 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 OR51T1Q8NGJ9 327 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 OR10K1Q8NGX5 313 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 CNIH3Q8TBE1 160 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 TRUB1Q8WWH5 349 aaKnown RBP11.75□□□□□ -0.53
CTSA-216ENST00000607212 PELI1Q96FA3 418 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 CENPNQ96H22 339 aaPredicted RBP11.75□□□□□ -0.53
CTSA-216ENST00000607212 ALG8Q9BVK2 526 aa11.75□□□□□ -0.53
CTSA-216ENST00000607212 OR4C45A6NMZ5 311 aa11.74□□□□□ -0.53
CTSA-216ENST00000607212 CCRL2O00421 344 aa11.74□□□□□ -0.53
CTSA-216ENST00000607212 HSD17B6O14756 317 aa11.74□□□□□ -0.53
CTSA-216ENST00000607212 RAB3AP20336 220 aa11.74□□□□□ -0.53
CTSA-216ENST00000607212 SSTR5P35346 364 aa11.74□□□□□ -0.53
CTSA-216ENST00000607212 CXorf66Q5JRM2 361 aaPredicted RBP11.74□□□□□ -0.53
CTSA-216ENST00000607212 MEDAGQ5VYS4 303 aa11.74□□□□□ -0.53
CTSA-216ENST00000607212 TEX38Q6PEX7 206 aa11.74□□□□□ -0.53
CTSA-216ENST00000607212 OR5AK2Q8NH90 309 aa11.74□□□□□ -0.53
CTSA-216ENST00000607212 NEK7Q8TDX7 302 aa11.74□□□□□ -0.53
CTSA-216ENST00000607212 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
CTSA-216ENST00000607212 OSBPL10Q9BXB5 764 aa11.74□□□□□ -0.53
CTSA-216ENST00000607212 ING4Q9UNL4 249 aa11.74□□□□□ -0.53
CTSA-216ENST00000607212 TRAV24A0A0B4J272 114 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 FAM90A18PA6NE21 464 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 FAM90A16PA6NEW6 464 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 FAM90A20PA6NIJ5 464 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 FAM90A9PA6NNJ1 464 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 FAM90A12PA8MX19 464 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 FAM90A5PA8MXJ8 464 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 CCL24O00175 119 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 AP4M1O00189 453 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 GAPDHP04406 335 aaKnown RBP11.73□□□□□ -0.53
CTSA-216ENST00000607212 FAM90A15PP0C7V4 464 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 FAM90A13PP0C7W8 464 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 FAM90A14PP0C7W9 464 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 FAM90A24PP0C7X0 464 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 IL3RAP26951 378 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 SOX2P48431 317 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 GP2P55259 537 aaKnown RBP11.73□□□□□ -0.53
CTSA-216ENST00000607212 ZP1P60852 638 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 IL13RA2Q14627 380 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 DEFB136Q30KP8 78 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 PIGYQ3MUY2 71 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 OR5M8Q8NGP6 311 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 PLPPR1Q8TBJ4 325 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 S100A13Q99584 98 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 GON7Q9BXV9 100 aa11.73□□□□□ -0.53
CTSA-216ENST00000607212 TMEM212A6NML5 194 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 SDCBPO00560 298 aaPredicted RBP11.72□□□□□ -0.53
CTSA-216ENST00000607212 RAMP3O60896 148 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 IGHG2P01859 326 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 CSTBP04080 98 aaKnown RBP11.72□□□□□ -0.53
CTSA-216ENST00000607212 RPLP1P05386 114 aaKnown RBP11.72□□□□□ -0.53
CTSA-216ENST00000607212 RPSAP08865 295 aaKnown RBP11.72□□□□□ -0.53
CTSA-216ENST00000607212 ECI1P42126 302 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 KCNJ3P48549 501 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 LUMP51884 338 aaPredicted RBP11.72□□□□□ -0.53
CTSA-216ENST00000607212 GBX2P52951 348 aaPredicted RBP11.72□□□□□ -0.53
CTSA-216ENST00000607212 ATAD3CQ5T2N8 411 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 RSBN1Q5VWQ0 802 aaPredicted RBP11.72□□□□□ -0.53
CTSA-216ENST00000607212 LCNL1Q6ZST4 164 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 PXT1Q8NFP0 134 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 OR2T10Q8NGZ9 312 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 OR8U1Q8NH10 309 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 UBALD1Q8TB05 177 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 LGALS12Q96DT0 336 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 RAX2Q96IS3 184 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 PRR25Q96S07 402 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 P2RX4Q99571 388 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 RASL11BQ9BPW5 248 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 PDCD1LG2Q9BQ51 273 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 DPCDQ9BVM2 203 aaPredicted RBP11.72□□□□□ -0.53
CTSA-216ENST00000607212 TAS2R4Q9NYW5 299 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 AASSQ9UDR5 926 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 U3KQK5 164 aa11.72□□□□□ -0.53
CTSA-216ENST00000607212 IGHV1-3A0A0C4DH29 117 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 TMEM30CPA0ZSE6 113 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 GABRPO00591 440 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 MPZL2O60487 215 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 OR7C1O76099 320 aaPredicted RBP11.71□□□□□ -0.53
CTSA-216ENST00000607212 ZFPL1O95159 310 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 LY86O95711 162 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 NHLRC4P0CG21 123 aaPredicted RBP11.71□□□□□ -0.53
CTSA-216ENST00000607212 CGB3P0DN86 165 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 CGB7P0DN87 165 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 GPR12P47775 334 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 SNRPGP62308 76 aaKnown RBP11.71□□□□□ -0.53
CTSA-216ENST00000607212 GPR50Q13585 617 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 GALEQ14376 348 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 PNLIPRP3Q17RR3 467 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 C9orf66Q5T8R8 295 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 ELP2Q6IA86 826 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms