RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 FOXRED2Q8IWF2 684 aa13.17□□□□□ -0.3
CCDC12-210ENST00000604181 CCDC197Q8NCU1 140 aa13.17□□□□□ -0.3
CCDC12-210ENST00000604181 OR13C3Q8NGS6 347 aa13.17□□□□□ -0.3
CCDC12-210ENST00000604181 GABARAPL1Q9H0R8 117 aa13.17□□□□□ -0.3
CCDC12-210ENST00000604181 ABCG5Q9H222 651 aa13.17□□□□□ -0.3
CCDC12-210ENST00000604181 ZMAT5Q9UDW3 170 aaKnown RBP13.17□□□□□ -0.3
CCDC12-210ENST00000604181 IGHV1-3A0A0C4DH29 117 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 OR4C45A6NMZ5 311 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 J3QRE1 110 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 AP4M1O00189 453 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 HSD17B6O14756 317 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 OCM2P0CE71 109 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 OCMP0CE72 109 aaPredicted RBP13.16□□□□□ -0.3
CCDC12-210ENST00000604181 TMEM225BP0DP42 221 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 ATP6V1E1P36543 226 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 CFHR3Q02985 330 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 GPR50Q13585 617 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 ATP6AP1Q15904 470 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 ZSCAN26Q16670 478 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 PNLIPRP3Q17RR3 467 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 PAN3Q58A45 887 aaKnown RBP13.16□□□□□ -0.3
CCDC12-210ENST00000604181 AMIGO2Q86SJ2 522 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 RNF152Q8N8N0 203 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 OR5M8Q8NGP6 311 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 HAVCR2Q8TDQ0 301 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 SLC7A6OSQ96CW6 309 aaPredicted RBP13.16□□□□□ -0.3
CCDC12-210ENST00000604181 HSPB9Q9BQS6 159 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 PLSCR3Q9NRY6 295 aa13.16□□□□□ -0.3
CCDC12-210ENST00000604181 NCBP2LA6PVI3 153 aaKnown RBP13.15□□□□□ -0.3
CCDC12-210ENST00000604181 ZNF736B4DX44 427 aaPredicted RBP13.15□□□□□ -0.3
CCDC12-210ENST00000604181 CDX1P47902 265 aaPredicted RBP13.15□□□□□ -0.3
CCDC12-210ENST00000604181 GP2P55259 537 aaKnown RBP13.15□□□□□ -0.3
CCDC12-210ENST00000604181 ZNF816Q0VGE8 651 aaPredicted RBP13.15□□□□□ -0.3
CCDC12-210ENST00000604181 FHL3Q13643 280 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 KISS1Q15726 138 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 PIGYQ3MUY2 71 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 ASPHD1Q5U4P2 390 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 LPCAT4Q643R3 524 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 MOB3BQ86TA1 216 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 TGIF2LXQ8IUE1 241 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 ZNF565Q8N9K5 539 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 OR10K1Q8NGX5 313 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 OR10X1Q8NGY0 326 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 OR8U1Q8NH10 309 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 MUC7Q8TAX7 377 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 UBALD1Q8TB05 177 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 CNIH3Q8TBE1 160 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 PELI1Q96FA3 418 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 NCOR1P1Q9H4R4 102 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 ZCCHC4Q9H5U6 513 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 RHOFQ9HBH0 211 aa13.15□□□□□ -0.3
CCDC12-210ENST00000604181 SLC16A6O15403 523 aa13.14□□□□□ -0.31
CCDC12-210ENST00000604181 GYG2O15488 501 aa13.14□□□□□ -0.31
CCDC12-210ENST00000604181 HTR1AP08908 422 aa13.14□□□□□ -0.31
CCDC12-210ENST00000604181 CHATP28329 748 aa13.14□□□□□ -0.31
CCDC12-210ENST00000604181 C21orf33P30042 268 aaPredicted RBP13.14□□□□□ -0.31
CCDC12-210ENST00000604181 MTNR1BP49286 362 aa13.14□□□□□ -0.31
CCDC12-210ENST00000604181 FOXE3Q13461 319 aa13.14□□□□□ -0.31
CCDC12-210ENST00000604181 ZNF260Q3ZCT1 412 aa13.14□□□□□ -0.31
CCDC12-210ENST00000604181 CXorf66Q5JRM2 361 aaPredicted RBP13.14□□□□□ -0.31
CCDC12-210ENST00000604181 SBSPONQ8IVN8 264 aa13.14□□□□□ -0.31
CCDC12-210ENST00000604181 IZUMO1Q8IYV9 350 aa13.14□□□□□ -0.31
CCDC12-210ENST00000604181 TMEM104Q8NE00 496 aa13.14□□□□□ -0.31
CCDC12-210ENST00000604181 OR8J1Q8NGP2 316 aa13.14□□□□□ -0.31
CCDC12-210ENST00000604181 RIBC2Q9H4K1 309 aa13.14□□□□□ -0.31
CCDC12-210ENST00000604181 LIN7CQ9NUP9 197 aaKnown RBP13.14□□□□□ -0.31
CCDC12-210ENST00000604181 ZNF256Q9Y2P7 627 aaPredicted RBP13.14□□□□□ -0.31
CCDC12-210ENST00000604181 CCRL2O00421 344 aa13.13□□□□□ -0.31
CCDC12-210ENST00000604181 HCKP08631 526 aa13.13□□□□□ -0.31
CCDC12-210ENST00000604181 CCR9P51686 369 aa13.13□□□□□ -0.31
CCDC12-210ENST00000604181 TMED1Q13445 227 aa13.13□□□□□ -0.31
CCDC12-210ENST00000604181 ZNF691Q5VV52 312 aa13.13□□□□□ -0.31
CCDC12-210ENST00000604181 ELP2Q6IA86 826 aa13.13□□□□□ -0.31
CCDC12-210ENST00000604181 ZDHHC13Q8IUH4 622 aa13.13□□□□□ -0.31
CCDC12-210ENST00000604181 GABARAPL3Q9BY60 117 aa13.13□□□□□ -0.31
CCDC12-210ENST00000604181 C15orf65H3BRN8 121 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 J3QLW9 94 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 SLC31A2O15432 143 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 IGHG4P01861 327 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 GAPDHP04406 335 aaKnown RBP13.12□□□□□ -0.31
CCDC12-210ENST00000604181 ELANEP08246 267 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 DBTP11182 482 aaKnown RBP13.12□□□□□ -0.31
CCDC12-210ENST00000604181 ZNF19P17023 458 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 F2RL1P55085 397 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 PAX5Q02548 391 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 ALKBH1Q13686 389 aaKnown RBP13.12□□□□□ -0.31
CCDC12-210ENST00000604181 DNAL1Q4LDG9 190 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 OR51A2Q8NGJ7 313 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 C4orf3Q8WVX3 66 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 ST6GALNAC6Q969X2 333 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 RNFT2Q96EX2 444 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 C4orf36Q96KX1 117 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 BARHL1Q9BZE3 327 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 AASSQ9UDR5 926 aa13.12□□□□□ -0.31
CCDC12-210ENST00000604181 HYDINQ4G0P3 5121 aa13.11□□□□□ -0.31
CCDC12-210ENST00000604181 IGHV3-43A0A0B4J1X8 118 aa13.11□□□□□ -0.31
CCDC12-210ENST00000604181 DAPL1A0PJW8 107 aa13.11□□□□□ -0.31
CCDC12-210ENST00000604181 E9PI62 339 aa13.11□□□□□ -0.31
CCDC12-210ENST00000604181 GABRPO00591 440 aa13.11□□□□□ -0.31
CCDC12-210ENST00000604181 SULT1B1O43704 296 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms