RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 GYPAP02724 150 aa15.04■□□□□ -0
VRK3-225ENST00000601912 GLP1RP43220 463 aa15.04■□□□□ -0
VRK3-225ENST00000601912 PAX5Q02548 391 aa15.04■□□□□ -0
VRK3-225ENST00000601912 KCNJ8Q15842 424 aa15.04■□□□□ -0
VRK3-225ENST00000601912 OR13C8Q8NGS7 320 aa15.04■□□□□ -0
VRK3-225ENST00000601912 SCGB3A2Q96PL1 93 aa15.04■□□□□ -0
VRK3-225ENST00000601912 DNTTIP1Q9H147 329 aa15.04■□□□□ -0
VRK3-225ENST00000601912 MYOZ1Q9NP98 299 aaPredicted RBP15.04■□□□□ -0
VRK3-225ENST00000601912 KCNIP1Q9NZI2 227 aa15.04■□□□□ -0
VRK3-225ENST00000601912 SPTAN1Q13813 2472 aaKnown RBP15.04■□□□□ -0
VRK3-225ENST00000601912 MEIKINA0A087WXM9 373 aa15.03■□□□□ -0
VRK3-225ENST00000601912 PRAF2O60831 178 aa15.03■□□□□ -0
VRK3-225ENST00000601912 RCC1P18754 421 aaPredicted RBP15.03■□□□□ -0
VRK3-225ENST00000601912 HLA-DRB3P79483 266 aa15.03■□□□□ -0
VRK3-225ENST00000601912 TLE4Q04727 773 aa15.03■□□□□ -0
VRK3-225ENST00000601912 ATPAF1Q5TC12 328 aaPredicted RBP15.03■□□□□ -0
VRK3-225ENST00000601912 DHRS11Q6UWP2 260 aa15.03■□□□□ -0
VRK3-225ENST00000601912 ZNF788Q6ZQV5 615 aa15.03■□□□□ -0
VRK3-225ENST00000601912 ZDHHC22Q8N966 263 aa15.03■□□□□ -0
VRK3-225ENST00000601912 ZNRF1Q8ND25 227 aa15.03■□□□□ -0
VRK3-225ENST00000601912 MBNL3Q9NUK0 354 aaKnown RBP15.03■□□□□ -0
VRK3-225ENST00000601912 KIF25Q9UIL4 384 aa15.03■□□□□ -0
VRK3-225ENST00000601912 MAB21L2Q9Y586 359 aa15.03■□□□□ -0
VRK3-225ENST00000601912 TK1P04183 234 aa15.03■□□□□ -0
VRK3-225ENST00000601912 SCTP09683 121 aa15.03■□□□□ -0
VRK3-225ENST00000601912 ECI1P42126 302 aa15.03■□□□□ -0
VRK3-225ENST00000601912 MECP2P51608 486 aaKnown RBP15.03■□□□□ -0
VRK3-225ENST00000601912 SEC61A1P61619 476 aaKnown RBP15.03■□□□□ -0
VRK3-225ENST00000601912 IL13RA1P78552 427 aa15.03■□□□□ -0
VRK3-225ENST00000601912 MRPS11P82912 194 aaKnown RBP15.03■□□□□ -0
VRK3-225ENST00000601912 PEG10Q86TG7 708 aaKnown RBP15.03■□□□□ -0
VRK3-225ENST00000601912 OR4A4PQ8NGN8 299 aa15.03■□□□□ -0
VRK3-225ENST00000601912 GIMAP1Q8WWP7 306 aa15.03■□□□□ -0
VRK3-225ENST00000601912 DACT3Q96B18 629 aaPredicted RBP15.03■□□□□ -0
VRK3-225ENST00000601912 COQ2Q96H96 371 aa15.03■□□□□ -0
VRK3-225ENST00000601912 MED30Q96HR3 178 aa15.03■□□□□ -0
VRK3-225ENST00000601912 GAFA1Q96PS6 74 aa15.03■□□□□ -0
VRK3-225ENST00000601912 CCL13Q99616 98 aa15.03■□□□□ -0
VRK3-225ENST00000601912 ZNF2Q9BSG1 426 aaPredicted RBP15.03■□□□□ -0
VRK3-225ENST00000601912 FAM234AQ9H0X4 552 aa15.03■□□□□ -0
VRK3-225ENST00000601912 ALG5Q9Y673 324 aa15.03■□□□□ -0
VRK3-225ENST00000601912 UBR5O95071 2799 aaPredicted RBP15.02■□□□□ -0
VRK3-225ENST00000601912 A0A0B4J293 547 aa15.02□□□□□ -0.01
VRK3-225ENST00000601912 COL8A2P25067 703 aa15.02□□□□□ -0.01
VRK3-225ENST00000601912 EDDM3AQ14507 147 aa15.02□□□□□ -0.01
VRK3-225ENST00000601912 IGSF11Q5DX21 431 aa15.02□□□□□ -0.01
VRK3-225ENST00000601912 SLC36A1Q7Z2H8 476 aa15.02□□□□□ -0.01
VRK3-225ENST00000601912 LHFPL1Q86WI0 220 aa15.02□□□□□ -0.01
VRK3-225ENST00000601912 TMEM185AQ8NFB2 350 aa15.02□□□□□ -0.01
VRK3-225ENST00000601912 CLEC4MQ9H2X3 399 aaPredicted RBP15.02□□□□□ -0.01
VRK3-225ENST00000601912 PCDHB10Q9UN67 800 aa15.02□□□□□ -0.01
VRK3-225ENST00000601912 TANC2Q9HCD6 1990 aa15.02□□□□□ -0.01
VRK3-225ENST00000601912 CHD6Q8TD26 2715 aa15.02□□□□□ -0.01
VRK3-225ENST00000601912 SIGLEC5O15389 551 aa15.01□□□□□ -0.01
VRK3-225ENST00000601912 TMPRSS2O15393 492 aa15.01□□□□□ -0.01
VRK3-225ENST00000601912 NDUFA2O43678 99 aa15.01□□□□□ -0.01
VRK3-225ENST00000601912 COX6B1P14854 86 aa15.01□□□□□ -0.01
VRK3-225ENST00000601912 ANXA7P20073 488 aaKnown RBP15.01□□□□□ -0.01
VRK3-225ENST00000601912 FCGR2CP31995 323 aa15.01□□□□□ -0.01
VRK3-225ENST00000601912 GLIPR1P48060 266 aa15.01□□□□□ -0.01
VRK3-225ENST00000601912 NPY4RP50391 375 aa15.01□□□□□ -0.01
VRK3-225ENST00000601912 CARTPTQ16568 116 aa15.01□□□□□ -0.01
VRK3-225ENST00000601912 C6orf183Q5T699 404 aa15.01□□□□□ -0.01
VRK3-225ENST00000601912 BEX2Q9BXY8 128 aa15.01□□□□□ -0.01
VRK3-225ENST00000601912 BEX1Q9HBH7 125 aa15.01□□□□□ -0.01
VRK3-225ENST00000601912 GPN1Q9HCN4 374 aaPredicted RBP15.01□□□□□ -0.01
VRK3-225ENST00000601912 TRAV39A0A0B4J263 110 aa15□□□□□ -0.01
VRK3-225ENST00000601912 J3QKU1 62 aa15□□□□□ -0.01
VRK3-225ENST00000601912 BET1O15155 118 aa15□□□□□ -0.01
VRK3-225ENST00000601912 FSTL3O95633 263 aa15□□□□□ -0.01
VRK3-225ENST00000601912 PLA2G2AP14555 144 aa15□□□□□ -0.01
VRK3-225ENST00000601912 SURF2Q15527 256 aaPredicted RBP15□□□□□ -0.01
VRK3-225ENST00000601912 AADACL3Q5VUY0 350 aa15□□□□□ -0.01
VRK3-225ENST00000601912 METTL11BQ5VVY1 283 aa15□□□□□ -0.01
VRK3-225ENST00000601912 ZNF660Q6AZW8 331 aaPredicted RBP15□□□□□ -0.01
VRK3-225ENST00000601912 TRAT1Q6PIZ9 186 aa15□□□□□ -0.01
VRK3-225ENST00000601912 TMED4Q7Z7H5 227 aa15□□□□□ -0.01
VRK3-225ENST00000601912 MARCH1Q8TCQ1 289 aa15□□□□□ -0.01
VRK3-225ENST00000601912 MRGPRFQ96AM1 343 aa15□□□□□ -0.01
VRK3-225ENST00000601912 ALX4Q9H161 411 aaPredicted RBP15□□□□□ -0.01
VRK3-225ENST00000601912 TAF9BQ9HBM6 251 aa15□□□□□ -0.01
VRK3-225ENST00000601912 DSCAMO60469 2012 aa15□□□□□ -0.01
VRK3-225ENST00000601912 A0A0A6YYJ9 748 aa15□□□□□ -0.01
VRK3-225ENST00000601912 C7orf66A4D0T2 115 aa15□□□□□ -0.01
VRK3-225ENST00000601912 OR5H14A6NHG9 310 aa15□□□□□ -0.01
VRK3-225ENST00000601912 CEACAM18A8MTB9 384 aa15□□□□□ -0.01
VRK3-225ENST00000601912 LYNX1G3V0Z9 82 aa15□□□□□ -0.01
VRK3-225ENST00000601912 IL5P05113 134 aa15□□□□□ -0.01
VRK3-225ENST00000601912 LYNX1P0DP58 116 aa15□□□□□ -0.01
VRK3-225ENST00000601912 DAOP14920 347 aa15□□□□□ -0.01
VRK3-225ENST00000601912 FPR2P25090 351 aa15□□□□□ -0.01
VRK3-225ENST00000601912 ERP29P30040 261 aaKnown RBP15□□□□□ -0.01
VRK3-225ENST00000601912 P2RX3P56373 397 aa15□□□□□ -0.01
VRK3-225ENST00000601912 EDDM3BP56851 147 aa15□□□□□ -0.01
VRK3-225ENST00000601912 HMGN3Q15651 99 aa15□□□□□ -0.01
VRK3-225ENST00000601912 SP5Q6BEB4 398 aaPredicted RBP15□□□□□ -0.01
VRK3-225ENST00000601912 ZNF554Q86TJ5 538 aa15□□□□□ -0.01
VRK3-225ENST00000601912 PRR18Q8N4B5 295 aa15□□□□□ -0.01
VRK3-225ENST00000601912 FAM216BQ8N7L0 139 aa15□□□□□ -0.01
VRK3-225ENST00000601912 ZNF565Q8N9K5 539 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms