RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 KCTD21Q4G0X4 260 aa13.69□□□□□ -0.22
TRIM28-215ENST00000601150 OR6M1Q8NGM8 313 aa13.69□□□□□ -0.22
TRIM28-215ENST00000601150 NEK7Q8TDX7 302 aa13.69□□□□□ -0.22
TRIM28-215ENST00000601150 DYRK2Q92630 601 aa13.69□□□□□ -0.22
TRIM28-215ENST00000601150 Q96M66 194 aa13.69□□□□□ -0.22
TRIM28-215ENST00000601150 CLEC7AQ9BXN2 247 aa13.69□□□□□ -0.22
TRIM28-215ENST00000601150 MEGF9Q9H1U4 602 aa13.69□□□□□ -0.22
TRIM28-215ENST00000601150 RCC2Q9P258 522 aaKnown RBP13.69□□□□□ -0.22
TRIM28-215ENST00000601150 KBTBD11-OT1A0A1B0GTJ5 212 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 TMEM30CPA0ZSE6 113 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 FAM181BA6NEQ2 426 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 MCRIP1C9JLW8 97 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 H3BUI4 141 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 CCRL2O00421 344 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 SLC22A1O15245 554 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 CRYBA1P05813 215 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 CGB3P0DN86 165 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 CGB7P0DN87 165 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 FOXL1Q12952 345 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 RBM39Q14498 530 aaKnown RBP13.68□□□□□ -0.22
TRIM28-215ENST00000601150 C17orf58Q2M2W7 97 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 RAB12Q6IQ22 244 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 BRICD5Q6PL45 260 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 CD200R1LQ6Q8B3 271 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 OR13A1Q8NGR1 328 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 OR5R1Q8NH85 324 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 FAM46BQ96A09 425 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 GFI1Q99684 422 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 PLGRKTQ9HBL7 147 aa13.68□□□□□ -0.22
TRIM28-215ENST00000601150 AK6Q9Y3D8 172 aaKnown RBP13.68□□□□□ -0.22
TRIM28-215ENST00000601150 TRDV1A0A1B0GX56 115 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 SLC17A2O00624 439 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 RRP9O43818 475 aaKnown RBP13.67□□□□□ -0.22
TRIM28-215ENST00000601150 GPR137BO60478 399 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 BPNT1O95861 308 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 MPIG6BO95866 241 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 VSIG8P0DPA2 414 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 GALP22466 123 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 OMGP23515 440 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 GDNFP39905 211 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 RPL15P61313 204 aaKnown RBP13.67□□□□□ -0.22
TRIM28-215ENST00000601150 AANATQ16613 207 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 MINOS1Q5TGZ0 78 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 LHFPL4Q7Z7J7 247 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 RTN4RL2Q86UN3 420 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 ABHD12Q8N2K0 398 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 KCNG3Q8TAE7 436 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 MALSU1Q96EH3 234 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 SSX3Q99909 188 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 CALYQ9NYX4 217 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 VPREB3Q9UKI3 123 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 PEX16Q9Y5Y5 336 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 MINOS1-NBL1R4GNA1 71 aa13.67□□□□□ -0.22
TRIM28-215ENST00000601150 H3BUX3 64 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 GLAP06280 429 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 FUT3P21217 361 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 CD34P28906 385 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 PSMD7P51665 324 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 LRRC75BQ2VPJ9 315 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 AWAT1Q58HT5 328 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 OR10K2Q6IF99 312 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 BAIAP2L2Q6UXY1 529 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 ZNF497Q6ZNH5 498 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 GDPGP1Q6ZNW5 385 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 MRGPRDQ8TDS7 321 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 TMEM59Q9BXS4 323 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 LINC00574Q9H8X3 128 aa13.66□□□□□ -0.22
TRIM28-215ENST00000601150 A0A087X0M5 115 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 TRAV1-2A0A0B4J238 106 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 TRAV39A0A0B4J263 110 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 A0A1B0GX30 115 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 TMEM14DPA8MWL7 114 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 NPIPB11E5RHQ5 1161 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 PDCD5O14737 125 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 PDCD6O75340 191 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 IL1AP01583 271 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 MT-ND4P03905 459 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 GZMHP20718 246 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 MYL9P24844 172 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 NFYBP25208 207 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 PAX6P26367 422 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 RANBP1P43487 201 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 RPS27AP62979 156 aaKnown RBP13.65□□□□□ -0.22
TRIM28-215ENST00000601150 QRFPP83859 136 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 P2RY14Q15391 338 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 RAB11BQ15907 218 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 LDLRAD2Q5SZI1 272 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 SIGIRRQ6IA17 410 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 ZNF596Q8TC21 504 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 KIRREL1Q96J84 757 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 ZNF286AQ9HBT8 521 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 ETAA1Q9NY74 926 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 IDI2-AS1Q9NZ38 188 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 V9GY05 133 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 TENM1Q9UKZ4 2725 aa13.65□□□□□ -0.22
TRIM28-215ENST00000601150 FAM172BPA6NC97 362 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 AIPO00170 330 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 TOR1AO14656 332 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 CA11O75493 328 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 ARSBP15848 533 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms