RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 HTR1FP30939 366 aa13.07□□□□□ -0.32
USE1-208ENST00000600970 REG1BP48304 166 aa13.07□□□□□ -0.32
USE1-208ENST00000600970 ISL1P61371 349 aa13.07□□□□□ -0.32
USE1-208ENST00000600970 ZFAND6Q6FIF0 208 aa13.07□□□□□ -0.32
USE1-208ENST00000600970 SLC16A12Q6ZSM3 486 aa13.07□□□□□ -0.32
USE1-208ENST00000600970 IZUMO1Q8IYV9 350 aa13.07□□□□□ -0.32
USE1-208ENST00000600970 OR10H4Q8NGA5 316 aa13.07□□□□□ -0.32
USE1-208ENST00000600970 RFESDQ8TAC1 157 aa13.07□□□□□ -0.32
USE1-208ENST00000600970 NRBF2Q96F24 287 aa13.07□□□□□ -0.32
USE1-208ENST00000600970 MBOAT4Q96T53 435 aa13.07□□□□□ -0.32
USE1-208ENST00000600970 NEK6Q9HC98 313 aa13.07□□□□□ -0.32
USE1-208ENST00000600970 PLSCR3Q9NRY6 295 aa13.07□□□□□ -0.32
USE1-208ENST00000600970 WARS2Q9UGM6 360 aaKnown RBP13.07□□□□□ -0.32
USE1-208ENST00000600970 GNG8Q9UK08 70 aa13.07□□□□□ -0.32
USE1-208ENST00000600970 RRP9O43818 475 aaKnown RBP13.06□□□□□ -0.32
USE1-208ENST00000600970 MITFO75030 526 aaPredicted RBP13.06□□□□□ -0.32
USE1-208ENST00000600970 FKBP6O75344 327 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 FAM107AO95990 144 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 MT-ND2P03891 347 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 GAPDHP04406 335 aaKnown RBP13.06□□□□□ -0.32
USE1-208ENST00000600970 FRMD6-AS1P0C7T7 363 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 PSMB8P28062 276 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 TP53I3Q53FA7 332 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 ASPHD1Q5U4P2 390 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 OR10A7Q8NGE5 316 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 OR13C9Q8NGT0 318 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 OR2G2Q8NGZ5 317 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 OR2T10Q8NGZ9 312 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 MRGPRDQ8TDS7 321 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 CITED4Q96RK1 184 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 HSPB9Q9BQS6 159 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 ZMAT4Q9H898 229 aa13.06□□□□□ -0.32
USE1-208ENST00000600970 CSMD3Q7Z407 3707 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 TRAV24A0A0B4J272 114 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 ISG15P05161 165 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 VDAC1P21796 283 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 SSTR5P35346 364 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 ZNF85Q03923 595 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 PAN3Q58A45 887 aaKnown RBP13.05□□□□□ -0.32
USE1-208ENST00000600970 FAM27D1Q5T7N8 215 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 RSBN1Q5VWQ0 802 aaPredicted RBP13.05□□□□□ -0.32
USE1-208ENST00000600970 FAM220AQ7Z4H9 259 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 MYOZ3Q8TDC0 251 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 RNFT2Q96EX2 444 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 S1PR3Q99500 378 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 RASL11BQ9BPW5 248 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 BARHL1Q9BZE3 327 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 FRRS1LQ9P0K9 344 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 MYRFQ9Y2G1 1151 aa13.05□□□□□ -0.32
USE1-208ENST00000600970 I3L521 148 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 HCKP08631 526 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 OR8U8P0C7N1 319 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 T-ENOLP0DO92 83 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 TMEM225BP0DP42 221 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 CALB2P22676 271 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 MTNR1BP49286 362 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 ZP1P60852 638 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 ZNF429Q86V71 674 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 TMEM104Q8NE00 496 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 OR51A4Q8NGJ6 313 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 OR1N2Q8NGR9 330 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 OR10AC1Q8NH08 325 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 PLPPR1Q8TBJ4 325 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 UTP4Q969X6 686 aaKnown RBP13.04□□□□□ -0.32
USE1-208ENST00000600970 NR1H4Q96RI1 486 aaPredicted RBP13.04□□□□□ -0.32
USE1-208ENST00000600970 THTPAQ9BU02 230 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 GNB4Q9HAV0 340 aa13.04□□□□□ -0.32
USE1-208ENST00000600970 TRAV39A0A0B4J263 110 aa13.03□□□□□ -0.32
USE1-208ENST00000600970 MOSP00540 346 aa13.03□□□□□ -0.32
USE1-208ENST00000600970 DBTP11182 482 aaKnown RBP13.03□□□□□ -0.32
USE1-208ENST00000600970 CD1BP29016 333 aa13.03□□□□□ -0.32
USE1-208ENST00000600970 ATP6V1E1P36543 226 aa13.03□□□□□ -0.32
USE1-208ENST00000600970 NANOS3P60323 173 aaKnown RBP13.03□□□□□ -0.32
USE1-208ENST00000600970 PAX5Q02548 391 aa13.03□□□□□ -0.32
USE1-208ENST00000600970 ZNF616Q08AN1 781 aa13.03□□□□□ -0.32
USE1-208ENST00000600970 KIAA0141Q14154 515 aaPredicted RBP13.03□□□□□ -0.32
USE1-208ENST00000600970 SPATA24Q86W54 205 aa13.03□□□□□ -0.32
USE1-208ENST00000600970 OR13C3Q8NGS6 347 aa13.03□□□□□ -0.32
USE1-208ENST00000600970 CNIH3Q8TBE1 160 aa13.03□□□□□ -0.32
USE1-208ENST00000600970 RBMXL1Q96E39 390 aaKnown RBP13.03□□□□□ -0.32
USE1-208ENST00000600970 KCTD7Q96MP8 289 aa13.03□□□□□ -0.32
USE1-208ENST00000600970 ISYNA1Q9NPH2 558 aa13.03□□□□□ -0.32
USE1-208ENST00000600970 ZNF736B4DX44 427 aaPredicted RBP13.02□□□□□ -0.33
USE1-208ENST00000600970 IGF1P05019 195 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 SPNP16150 400 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 SOX6P35712 828 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 F2RL1P55085 397 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 RUNX1Q01196 453 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 ELP2Q6IA86 826 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 FAM53AQ6NSI3 398 aaPredicted RBP13.02□□□□□ -0.33
USE1-208ENST00000600970 ADAMTSL5Q6ZMM2 481 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 FAM71E2Q8N5Q1 922 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 ZNF491Q8N8L2 437 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 RTN4IP1Q8WWV3 396 aaPredicted RBP13.02□□□□□ -0.33
USE1-208ENST00000600970 DCUN1D4Q92564 292 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 ST6GALNAC6Q969X2 333 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 UBE2E2Q96LR5 201 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 KLK15Q9H2R5 256 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 ZCCHC4Q9H5U6 513 aa13.02□□□□□ -0.33
USE1-208ENST00000600970 ZNF580Q9UK33 172 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms