RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 RABL2BQ9UNT1 228 aa16.91■□□□□ 0.3
PNKP-215ENST00000600910 ZNF469Q96JG9 3925 aaPredicted RBP16.91■□□□□ 0.3
PNKP-215ENST00000600910 LOC105371242A0A075B767 164 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 TRBV23-1A0A0A0MS06 115 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 TRAV39A0A0B4J263 110 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 MEIOCA2RUB1 952 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 CYSRT1A8MQ03 144 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 H7C1Q1 480 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 SSX5O60225 188 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 FOXH1O75593 365 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 ECDO95905 644 aaPredicted RBP16.9■□□□□ 0.3
PNKP-215ENST00000600910 PRSS3P35030 304 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 CD276Q5ZPR3 534 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 Q6ZPA2 131 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 FAM185AQ8N0U4 392 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 C15orf40Q8WUR7 153 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 RIMS4Q9H426 269 aaPredicted RBP16.9■□□□□ 0.3
PNKP-215ENST00000600910 RPUSD1Q9UJJ7 312 aaKnown RBP16.9■□□□□ 0.3
PNKP-215ENST00000600910 TRAPPC2LQ9UL33 140 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 CR1P17927 2039 aa16.9■□□□□ 0.3
PNKP-215ENST00000600910 ABCA2Q9BZC7 2435 aa16.89■□□□□ 0.29
PNKP-215ENST00000600910 MEF2CQ06413 473 aaPredicted RBP16.89■□□□□ 0.29
PNKP-215ENST00000600910 ZNF79Q15937 498 aa16.89■□□□□ 0.29
PNKP-215ENST00000600910 C11orf91Q3C1V1 193 aa16.89■□□□□ 0.29
PNKP-215ENST00000600910 TMEM200BQ69YZ2 307 aa16.89■□□□□ 0.29
PNKP-215ENST00000600910 TCF23Q7RTU1 214 aa16.89■□□□□ 0.29
PNKP-215ENST00000600910 SETD6Q8TBK2 473 aa16.89■□□□□ 0.29
PNKP-215ENST00000600910 NCOR1P1Q9H4R4 102 aa16.89■□□□□ 0.29
PNKP-215ENST00000600910 AKIP1Q9NQ31 210 aa16.89■□□□□ 0.29
PNKP-215ENST00000600910 OTOGQ6ZRI0 2925 aa16.89■□□□□ 0.29
PNKP-215ENST00000600910 MED13LQ71F56 2210 aa16.89■□□□□ 0.29
PNKP-215ENST00000600910 A0A1W2PQ09 198 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 hADV38S2A0JD32 116 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 MEIS3P1A6NDR6 274 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 FCGR3AP08637 254 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 ZNF273Q14593 569 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 RNASE12Q5GAN4 147 aaKnown RBP16.88■□□□□ 0.29
PNKP-215ENST00000600910 TRAPPC6BQ86SZ2 158 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 OR13A1Q8NGR1 328 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 C8orf46Q8TAG6 207 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 C1orf159Q96HA4 380 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 OR6C3Q9NZP0 311 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 LPAR3Q9UBY5 353 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 ZNF230Q9UIE0 474 aaPredicted RBP16.88■□□□□ 0.29
PNKP-215ENST00000600910 DSCAML1Q8TD84 2053 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 TRGV10A0A0A0MS01 117 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 TRBV6-6A0A0A6YYG2 114 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 PPIAL4CA0A0B4J2A2 164 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 PPIAL4GP0DN37 164 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 RCC1P18754 421 aaPredicted RBP16.88■□□□□ 0.29
PNKP-215ENST00000600910 PTBP1P26599 531 aaKnown RBP eCLIP16.88■□□□□ 0.29
PNKP-215ENST00000600910 GLP1RP43220 463 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 TMEM249Q2WGJ8 235 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 MFSD4AQ8N468 514 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 ZNF565Q8N9K5 539 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 MRGPRDQ8TDS7 321 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 POLR3KQ9Y2Y1 108 aaPredicted RBP16.88■□□□□ 0.29
PNKP-215ENST00000600910 LINC00312Q9Y6C7 94 aa16.88■□□□□ 0.29
PNKP-215ENST00000600910 ARHGAP32A7KAX9 2087 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 B4DSR2 109 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 CTDSPLO15194 276 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 LPLP06858 475 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 DTYMKP23919 212 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 ZNF45Q02386 682 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 PAX2Q02962 417 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 PYDC2Q56P42 97 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 ZNF880Q6PDB4 577 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 LY6G5BQ8NDX9 201 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 GPX8Q8TED1 209 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 S100ZQ8WXG8 99 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 MAFIPQ8WZ33 124 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 SCPEP1Q9HB40 452 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 MMP26Q9NRE1 261 aa16.87■□□□□ 0.29
PNKP-215ENST00000600910 MBNL3Q9NUK0 354 aaKnown RBP16.87■□□□□ 0.29
PNKP-215ENST00000600910 SULT1C2O00338 296 aa16.86■□□□□ 0.29
PNKP-215ENST00000600910 SMAD7O15105 426 aaKnown RBP16.86■□□□□ 0.29
PNKP-215ENST00000600910 MSMBP08118 114 aa16.86■□□□□ 0.29
PNKP-215ENST00000600910 MRPS10P82664 201 aaKnown RBP16.86■□□□□ 0.29
PNKP-215ENST00000600910 DGCR2P98153 550 aa16.86■□□□□ 0.29
PNKP-215ENST00000600910 GVQW1Q8N7I0 195 aa16.86■□□□□ 0.29
PNKP-215ENST00000600910 OR52I2Q8NH67 350 aa16.86■□□□□ 0.29
PNKP-215ENST00000600910 FCAMRQ8WWV6 532 aa16.86■□□□□ 0.29
PNKP-215ENST00000600910 CORO2AQ92828 525 aa16.86■□□□□ 0.29
PNKP-215ENST00000600910 DACT3Q96B18 629 aaPredicted RBP16.86■□□□□ 0.29
PNKP-215ENST00000600910 OCSTAMPQ9BR26 566 aa16.86■□□□□ 0.29
PNKP-215ENST00000600910 ST6GALNAC5Q9BVH7 336 aa16.86■□□□□ 0.29
PNKP-215ENST00000600910 Q9N2K0 584 aa16.86■□□□□ 0.29
PNKP-215ENST00000600910 UBE2J1Q9Y385 318 aaPredicted RBP16.86■□□□□ 0.29
PNKP-215ENST00000600910 KIAA2026Q5HYC2 2103 aa16.86■□□□□ 0.29
PNKP-215ENST00000600910 YLPM1P49750 1951 aaKnown RBP16.86■□□□□ 0.29
PNKP-215ENST00000600910 TEX15Q9BXT5 2789 aa16.86■□□□□ 0.29
PNKP-215ENST00000600910 CREBBPQ92793 2442 aa16.86■□□□□ 0.29
PNKP-215ENST00000600910 IGHV2-70DA0A0C4DH43 119 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 POM121CA8CG34 1229 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 GABARAPH6UMI1 98 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 ENSAO43768 121 aaKnown RBP16.85■□□□□ 0.29
PNKP-215ENST00000600910 FCER2P06734 321 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 LIPFP07098 398 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 IGHV4-31P0DP07 118 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 CCL3L1P16619 93 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms