RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 TTC23Q5W5X9 447 aa13.56□□□□□ -0.24
SMG9-210ENST00000600097 SLC16A12Q6ZSM3 486 aa13.56□□□□□ -0.24
SMG9-210ENST00000600097 C18orf65Q6ZTR6 163 aa13.56□□□□□ -0.24
SMG9-210ENST00000600097 TFAP2CQ92754 450 aa13.56□□□□□ -0.24
SMG9-210ENST00000600097 BARHL1Q9BZE3 327 aa13.56□□□□□ -0.24
SMG9-210ENST00000600097 IDI2-AS1Q9NZ38 188 aa13.56□□□□□ -0.24
SMG9-210ENST00000600097 PSG11Q9UQ72 335 aa13.56□□□□□ -0.24
SMG9-210ENST00000600097 MEIKINA0A087WXM9 373 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 H0YJX3 145 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 IL1AP01583 271 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 HTR1AP08908 422 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 TMEM225BP0DP42 221 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 MTNR1BP49286 362 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 NANOS3P60323 173 aaKnown RBP13.55□□□□□ -0.24
SMG9-210ENST00000600097 HNF4GQ14541 408 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 TEX38Q6PEX7 206 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 STPG2Q8N412 459 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 OR10A7Q8NGE5 316 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 OR51A4Q8NGJ6 313 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 OR13A1Q8NGR1 328 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 GON7Q9BXV9 100 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 ZCCHC4Q9H5U6 513 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 KIF25Q9UIL4 384 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 LINC00527Q9UJ94 153 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 MYRFQ9Y2G1 1151 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 RYR3Q15413 4870 aa13.55□□□□□ -0.24
SMG9-210ENST00000600097 DAPL1A0PJW8 107 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 CCL24O00175 119 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 AP4M1O00189 453 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 ZFPL1O95159 310 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 IGKV1D-33P01593 117 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 IGKV1-33P01594 117 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 IGHV3-7P01780 117 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 PAX5Q02548 391 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 KISS1Q15726 138 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 PAN3Q58A45 887 aaKnown RBP13.54□□□□□ -0.24
SMG9-210ENST00000600097 ELP2Q6IA86 826 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 DHRSXQ8N5I4 330 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 OR10AC1Q8NH08 325 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 LEAP2Q969E1 77 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 RAX2Q96IS3 184 aa13.54□□□□□ -0.24
SMG9-210ENST00000600097 NPIPB11E5RHQ5 1161 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 HSPB6O14558 160 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 HCKP08631 526 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 RPSAP08865 295 aaKnown RBP13.53□□□□□ -0.24
SMG9-210ENST00000600097 KCNJ3P48549 501 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 RAB25P57735 213 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 ZP1P60852 638 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 EBI3Q14213 229 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 DIAPH2-AS1Q14236 149 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 PNLIPRP3Q17RR3 467 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 SERPINA12Q8IW75 414 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 SETD9Q8NE22 299 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 OR5D14Q8NGL3 314 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 OR5M8Q8NGP6 311 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 OR10X1Q8NGY0 326 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 OR8U1Q8NH10 309 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 RHOXF1Q8NHV9 184 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 CNIH3Q8TBE1 160 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 CYGBQ8WWM9 190 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 CPNE2Q96FN4 548 aaPredicted RBP13.53□□□□□ -0.24
SMG9-210ENST00000600097 MYCBPQ99417 103 aaPredicted RBP13.53□□□□□ -0.24
SMG9-210ENST00000600097 NKX1-2Q9UD57 310 aaPredicted RBP13.53□□□□□ -0.24
SMG9-210ENST00000600097 LSM4Q9Y4Z0 139 aaKnown RBP13.53□□□□□ -0.24
SMG9-210ENST00000600097 DNAH9Q9NYC9 4486 aa13.53□□□□□ -0.24
SMG9-210ENST00000600097 TRAV24A0A0B4J272 114 aa13.52□□□□□ -0.25
SMG9-210ENST00000600097 OR4C45A6NMZ5 311 aa13.52□□□□□ -0.25
SMG9-210ENST00000600097 SULT1B1O43704 296 aa13.52□□□□□ -0.25
SMG9-210ENST00000600097 GABRB1P18505 474 aa13.52□□□□□ -0.25
SMG9-210ENST00000600097 GNG10P50151 68 aa13.52□□□□□ -0.25
SMG9-210ENST00000600097 ZNF816Q0VGE8 651 aaPredicted RBP13.52□□□□□ -0.25
SMG9-210ENST00000600097 ALKBH1Q13686 389 aaKnown RBP13.52□□□□□ -0.25
SMG9-210ENST00000600097 CXorf66Q5JRM2 361 aaPredicted RBP13.52□□□□□ -0.25
SMG9-210ENST00000600097 C9orf66Q5T8R8 295 aa13.52□□□□□ -0.25
SMG9-210ENST00000600097 TGIF2LXQ8IUE1 241 aa13.52□□□□□ -0.25
SMG9-210ENST00000600097 PXT1Q8NFP0 134 aa13.52□□□□□ -0.25
SMG9-210ENST00000600097 RFESDQ8TAC1 157 aa13.52□□□□□ -0.25
SMG9-210ENST00000600097 PELI1Q96FA3 418 aa13.52□□□□□ -0.25
SMG9-210ENST00000600097 MRPL48Q96GC5 212 aaKnown RBP13.52□□□□□ -0.25
SMG9-210ENST00000600097 DUX3Q96PT4 197 aa13.52□□□□□ -0.25
SMG9-210ENST00000600097 NR1H4Q96RI1 486 aaPredicted RBP13.52□□□□□ -0.25
SMG9-210ENST00000600097 VCX3BQ9H321 246 aa13.52□□□□□ -0.25
SMG9-210ENST00000600097 LIN7CQ9NUP9 197 aaKnown RBP13.52□□□□□ -0.25
SMG9-210ENST00000600097 NCBP2LA6PVI3 153 aaKnown RBP13.51□□□□□ -0.25
SMG9-210ENST00000600097 J3QLW9 94 aa13.51□□□□□ -0.25
SMG9-210ENST00000600097 J3QRE1 110 aa13.51□□□□□ -0.25
SMG9-210ENST00000600097 HSD17B6O14756 317 aa13.51□□□□□ -0.25
SMG9-210ENST00000600097 GAPDHP04406 335 aaKnown RBP13.51□□□□□ -0.25
SMG9-210ENST00000600097 ZNF19P17023 458 aa13.51□□□□□ -0.25
SMG9-210ENST00000600097 CDX1P47902 265 aaPredicted RBP13.51□□□□□ -0.25
SMG9-210ENST00000600097 IL13RA2Q14627 380 aa13.51□□□□□ -0.25
SMG9-210ENST00000600097 KIR2DS1Q14954 304 aa13.51□□□□□ -0.25
SMG9-210ENST00000600097 LTC4SQ16873 150 aa13.51□□□□□ -0.25
SMG9-210ENST00000600097 ZNF691Q5VV52 312 aa13.51□□□□□ -0.25
SMG9-210ENST00000600097 RSBN1Q5VWQ0 802 aaPredicted RBP13.51□□□□□ -0.25
SMG9-210ENST00000600097 PARP16Q8N5Y8 322 aa13.51□□□□□ -0.25
SMG9-210ENST00000600097 ACBD7Q8N6N7 88 aa13.51□□□□□ -0.25
SMG9-210ENST00000600097 MRGPRDQ8TDS7 321 aa13.51□□□□□ -0.25
SMG9-210ENST00000600097 RNFT2Q96EX2 444 aa13.51□□□□□ -0.25
SMG9-210ENST00000600097 ABCG5Q9H222 651 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms