RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 BATF2Q8N1L9 274 aa11.34□□□□□ -0.59
SHKBP1-218ENST00000598907 OSR2Q8N2R0 312 aa11.34□□□□□ -0.59
SHKBP1-218ENST00000598907 R3HDM4Q96D70 268 aa11.34□□□□□ -0.59
SHKBP1-218ENST00000598907 TM2D1Q9BX74 207 aa11.34□□□□□ -0.59
SHKBP1-218ENST00000598907 CST11Q9H112 138 aa11.34□□□□□ -0.59
SHKBP1-218ENST00000598907 LPAR5Q9H1C0 372 aa11.34□□□□□ -0.59
SHKBP1-218ENST00000598907 PPA2Q9H2U2 334 aa11.34□□□□□ -0.59
SHKBP1-218ENST00000598907 ELL3Q9HB65 397 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-218ENST00000598907 CLN8Q9UBY8 286 aa11.34□□□□□ -0.59
SHKBP1-218ENST00000598907 MIOXQ9UGB7 285 aa11.34□□□□□ -0.59
SHKBP1-218ENST00000598907 HYDINQ4G0P3 5121 aa11.34□□□□□ -0.59
SHKBP1-218ENST00000598907 CTDSP2O14595 271 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 ENSAO43768 121 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 CRTAPO75718 401 aaPredicted RBP11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 NXPH2O95156 264 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 CSTBP04080 98 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM201AQ5SY85 155 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 MZT2AQ6P582 158 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM89BQ8N5H3 189 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 MCFD2Q8NI22 146 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 EMG1Q92979 244 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 SLC25A38Q96DW6 304 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 SEH1LQ96EE3 360 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 Q96M66 194 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 TMEM246Q9BRR3 403 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 TMEM59Q9BXS4 323 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 ABCG5Q9H222 651 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 MIXL1Q9H2W2 232 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 BANF2Q9H503 90 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 PTTG2Q9NZH5 202 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 IL36RNQ9UBH0 155 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 COMMD3Q9UBI1 195 aa11.33□□□□□ -0.6
SHKBP1-218ENST00000598907 A0A0A6YYD4 124 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A10PA6NDY2 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A18PA6NE21 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A16PA6NEW6 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 OOEPA6NGQ2 149 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A20PA6NIJ5 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A8PA6NJQ4 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A7PA6NKC0 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FOXI3A8MTJ6 420 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A22PA8MWA6 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A12PA8MX19 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A5PA8MXJ8 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A23PA8MXZ1 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 C3orf84H3BNL1 204 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 LGALS8O00214 317 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A15PP0C7V4 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A13PP0C7W8 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A14PP0C7W9 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM90A24PP0C7X0 464 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 VSIG10L2P0DP72 767 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 PRKACAP17612 351 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 RBM11P57052 281 aaKnown RBP11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 IL13RA2Q14627 380 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 SMIM21Q3B7S5 101 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 SPIN3Q5JUX0 258 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 Q6P435 159 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 LINC00596Q86U02 117 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 CFHR4Q92496 578 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM46BQ96A09 425 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 B9D2Q9BPU9 175 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 SELENOIQ9C0D9 397 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 NLKQ9UBE8 527 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 ZNF222Q9UK12 451 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 ST3GAL6Q9Y274 331 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 FAM96BQ9Y3D0 163 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 DNAH1Q9P2D7 4330 aa11.32□□□□□ -0.6
SHKBP1-218ENST00000598907 HPGDSO60760 199 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 APOA1P02647 267 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 PSG2P11465 335 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 AMY2BP19961 511 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 CD33P20138 364 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 LMO1P25800 156 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 MPV17LQ2QL34 196 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 PIGYQ3MUY2 71 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 UBE2NLQ5JXB2 153 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 ATPAF1Q5TC12 328 aaPredicted RBP11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 WDR25Q64LD2 544 aaPredicted RBP11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 STUMQ69YW2 141 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 LYPD2Q6UXB3 125 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 SAMD12Q8N8I0 201 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 BOLLQ8N9W6 283 aaKnown RBP11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 C19orf18Q8NEA5 215 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 ANGPTL6Q8NI99 470 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 NICN1Q9BSH3 213 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 URM1Q9BTM9 101 aaKnown RBP11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 IFT22Q9H7X7 185 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
SHKBP1-218ENST00000598907 IGKV1D-17A0A075B6S4 117 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 TRAV38-1A0A0B4J264 116 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 RFPL4AA6NLU0 287 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 OR2AT4A6NND4 320 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 RFPL4AL1F8VTS6 287 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 RAB27BO00194 218 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 GEMIN2O14893 280 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 EIF4EP06730 217 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 CHRM2P08172 466 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 MMP9P14780 707 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms