RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 IGHV4-59P01825 116 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 MT-ND4P03905 459 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 VSIG8P0DPA2 414 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 MGMTP16455 207 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 GZMHP20718 246 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 DYNLT3P51808 116 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 TAF9Q16594 264 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 SYT6Q5T7P8 510 aaPredicted RBP14.3□□□□□ -0.12
USHBP1-209ENST00000598570 AWAT2Q6E213 333 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 OR52W1Q6IF63 320 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 RTN4RL2Q86UN3 420 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 FAM89BQ8N5H3 189 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 ZNF565Q8N9K5 539 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 OR6M1Q8NGM8 313 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 TM2D1Q9BX74 207 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 CHIAQ9BZP6 476 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 DPAGT1Q9H3H5 408 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 KIF25Q9UIL4 384 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 IGHV2-26A0A0B4J1V2 119 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 CCRL2O00421 344 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 LDLRAD4O15165 306 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 CA11O75493 328 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 OR7C1O76099 320 aaPredicted RBP14.29□□□□□ -0.12
USHBP1-209ENST00000598570 NDUFA7O95182 113 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 BPNT1O95861 308 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 HTR2CP28335 458 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 GDNFP39905 211 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 PSMD7P51665 324 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 ATXN7L3Q14CW9 347 aaPredicted RBP14.29□□□□□ -0.12
USHBP1-209ENST00000598570 MINOS1Q5TGZ0 78 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 OR13A1Q8NGR1 328 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 OR5R1Q8NH85 324 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 DUX5Q96PT3 197 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 SLITRK2Q9H156 845 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 MINOS1-NBL1R4GNA1 71 aa14.29□□□□□ -0.12
USHBP1-209ENST00000598570 SHISA3A0PJX4 238 aa14.28□□□□□ -0.12
USHBP1-209ENST00000598570 TRIM64CA6NLI5 447 aa14.28□□□□□ -0.12
USHBP1-209ENST00000598570 LY6LH3BQJ8 138 aa14.28□□□□□ -0.12
USHBP1-209ENST00000598570 C15orf65H3BRN8 121 aa14.28□□□□□ -0.12
USHBP1-209ENST00000598570 RRP9O43818 475 aaKnown RBP14.28□□□□□ -0.12
USHBP1-209ENST00000598570 FUT3P21217 361 aa14.28□□□□□ -0.12
USHBP1-209ENST00000598570 CDK2P24941 298 aa14.28□□□□□ -0.12
USHBP1-209ENST00000598570 RPS27AP62979 156 aaKnown RBP14.28□□□□□ -0.12
USHBP1-209ENST00000598570 UNC119Q13432 240 aa14.28□□□□□ -0.12
USHBP1-209ENST00000598570 ZNF782Q6ZMW2 699 aaPredicted RBP14.28□□□□□ -0.12
USHBP1-209ENST00000598570 DYNAPQ8N1N2 210 aa14.28□□□□□ -0.12
USHBP1-209ENST00000598570 KCNG3Q8TAE7 436 aa14.28□□□□□ -0.12
USHBP1-209ENST00000598570 CLEC7AQ9BXN2 247 aa14.28□□□□□ -0.12
USHBP1-209ENST00000598570 CST11Q9H112 138 aa14.28□□□□□ -0.12
USHBP1-209ENST00000598570 BANF2Q9H503 90 aa14.28□□□□□ -0.12
USHBP1-209ENST00000598570 A0A1W2PRD5 423 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 A0A1W2PRF3 423 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 A0A1W2PRM7 423 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 MEX3AA1L020 520 aaKnown RBP14.27□□□□□ -0.13
USHBP1-209ENST00000598570 FAM181BA6NEQ2 426 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 FOXI3A8MTJ6 420 aaPredicted RBP14.27□□□□□ -0.13
USHBP1-209ENST00000598570 ORC5O43913 435 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 RELBQ01201 579 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 FOXL1Q12952 345 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 RBM39Q14498 530 aaKnown RBP14.27□□□□□ -0.13
USHBP1-209ENST00000598570 OR2W3Q7Z3T1 314 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 LHFPL4Q7Z7J7 247 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 OR52M1Q8NGK5 317 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 OR4P4Q8NGL7 312 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 ZNF596Q8TC21 504 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 GCDHQ92947 438 aaPredicted RBP14.27□□□□□ -0.13
USHBP1-209ENST00000598570 KIRREL1Q96J84 757 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 SELENOIQ9C0D9 397 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 C1RLQ9NZP8 487 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 VPREB3Q9UKI3 123 aa14.27□□□□□ -0.13
USHBP1-209ENST00000598570 MEIKINA0A087WXM9 373 aa14.26□□□□□ -0.13
USHBP1-209ENST00000598570 TMEM30CPA0ZSE6 113 aa14.26□□□□□ -0.13
USHBP1-209ENST00000598570 CRTAPO75718 401 aaPredicted RBP14.26□□□□□ -0.13
USHBP1-209ENST00000598570 IL1AP01583 271 aa14.26□□□□□ -0.13
USHBP1-209ENST00000598570 COX7A1P24310 79 aa14.26□□□□□ -0.13
USHBP1-209ENST00000598570 CALRP27797 417 aaKnown RBP14.26□□□□□ -0.13
USHBP1-209ENST00000598570 RANBP1P43487 201 aa14.26□□□□□ -0.13
USHBP1-209ENST00000598570 RAB12Q6IQ22 244 aa14.26□□□□□ -0.13
USHBP1-209ENST00000598570 BAIAP2L2Q6UXY1 529 aa14.26□□□□□ -0.13
USHBP1-209ENST00000598570 ZNF554Q86TJ5 538 aa14.26□□□□□ -0.13
USHBP1-209ENST00000598570 ABHD12Q8N2K0 398 aa14.26□□□□□ -0.13
USHBP1-209ENST00000598570 C8orf31Q8N9H6 132 aa14.26□□□□□ -0.13
USHBP1-209ENST00000598570 MBNL3Q9NUK0 354 aaKnown RBP14.26□□□□□ -0.13
USHBP1-209ENST00000598570 CALYQ9NYX4 217 aa14.26□□□□□ -0.13
USHBP1-209ENST00000598570 AK6Q9Y3D8 172 aaKnown RBP14.26□□□□□ -0.13
USHBP1-209ENST00000598570 V9GY05 133 aa14.26□□□□□ -0.13
USHBP1-209ENST00000598570 POM121CA8CG34 1229 aa14.25□□□□□ -0.13
USHBP1-209ENST00000598570 MCRIP1C9JLW8 97 aa14.25□□□□□ -0.13
USHBP1-209ENST00000598570 HSPB6O14558 160 aa14.25□□□□□ -0.13
USHBP1-209ENST00000598570 GPR137BO60478 399 aa14.25□□□□□ -0.13
USHBP1-209ENST00000598570 PDCD6O75340 191 aa14.25□□□□□ -0.13
USHBP1-209ENST00000598570 CHATP28329 748 aa14.25□□□□□ -0.13
USHBP1-209ENST00000598570 LRRC75BQ2VPJ9 315 aa14.25□□□□□ -0.13
USHBP1-209ENST00000598570 AWAT1Q58HT5 328 aa14.25□□□□□ -0.13
USHBP1-209ENST00000598570 UTF1Q5T230 341 aa14.25□□□□□ -0.13
USHBP1-209ENST00000598570 PRAMEF5Q5TYX0 476 aa14.25□□□□□ -0.13
USHBP1-209ENST00000598570 BRICD5Q6PL45 260 aa14.25□□□□□ -0.13
USHBP1-209ENST00000598570 TRAPPC6BQ86SZ2 158 aa14.25□□□□□ -0.13
USHBP1-209ENST00000598570 PEX16Q9Y5Y5 336 aa14.25□□□□□ -0.13
USHBP1-209ENST00000598570 A0A1B0GUS0 222 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms