RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 DYNAPQ8N1N2 210 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 UFD1Q92890 307 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 TMED9Q9BVK6 235 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 ANKRD60Q9BZ19 345 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 BLOC1S6Q9UL45 172 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 TCF19Q9Y242 345 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 AMMECR1Q9Y4X0 333 aaPredicted RBP14.03□□□□□ -0.16
IRF3-208ENST00000594387 TENM1Q9UKZ4 2725 aa14.02□□□□□ -0.16
IRF3-208ENST00000594387 TMEM30CPA0ZSE6 113 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 FAM172BPA6NC97 362 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 MCRIP1C9JLW8 97 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 PEX14O75381 377 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 HSMCR30P0CW71 290 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 PROK1P58294 105 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 SLC35A2P78381 396 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 RBM48Q5RL73 367 aaKnown RBP14.02□□□□□ -0.17
IRF3-208ENST00000594387 IZUMO2Q6UXV1 221 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 OR9G1Q8NH87 305 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 MRGPRDQ8TDS7 321 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 AKR1E2Q96JD6 320 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 CITED1Q99966 193 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 UQCC2Q9BRT2 126 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 RAB9BQ9NP90 201 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 CALYQ9NYX4 217 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 IDI2-AS1Q9NZ38 188 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 GHRLQ9UBU3 117 aa14.02□□□□□ -0.17
IRF3-208ENST00000594387 MAGEA13PA6NCF6 341 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 CRTAPO75718 401 aaPredicted RBP14.01□□□□□ -0.17
IRF3-208ENST00000594387 CD34P28906 385 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 MNDAP41218 407 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 PAX5Q02548 391 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 TRAM1Q15629 374 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 C17orf58Q2M2W7 97 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 RSBN1Q5VWQ0 802 aaPredicted RBP14.01□□□□□ -0.17
IRF3-208ENST00000594387 CCDC144NLQ6NUI1 221 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 Q6ZTK2 550 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 CEACAM19Q7Z692 300 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 OR10A7Q8NGE5 316 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 OR4P4Q8NGL7 312 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 OR13A1Q8NGR1 328 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 PLPPR1Q8TBJ4 325 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 OR5M11Q96RB7 305 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 PRSS22Q9GZN4 317 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 CST11Q9H112 138 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 ZNF286AQ9HBT8 521 aa14.01□□□□□ -0.17
IRF3-208ENST00000594387 FBN3Q75N90 2809 aa14□□□□□ -0.17
IRF3-208ENST00000594387 A0A087X0M5 115 aa14□□□□□ -0.17
IRF3-208ENST00000594387 A0A1B0GX30 115 aa14□□□□□ -0.17
IRF3-208ENST00000594387 OOSP1A8MZH6 123 aa14□□□□□ -0.17
IRF3-208ENST00000594387 BUB1B-PAK6H3BSN5 160 aa14□□□□□ -0.17
IRF3-208ENST00000594387 IL1AP01583 271 aa14□□□□□ -0.17
IRF3-208ENST00000594387 UBBP0CG47 229 aa14□□□□□ -0.17
IRF3-208ENST00000594387 RANBP1P43487 201 aa14□□□□□ -0.17
IRF3-208ENST00000594387 SRSF4Q08170 494 aaKnown RBP14□□□□□ -0.17
IRF3-208ENST00000594387 LTC4SQ16873 150 aa14□□□□□ -0.17
IRF3-208ENST00000594387 HLA-DRB5Q30154 266 aa14□□□□□ -0.17
IRF3-208ENST00000594387 HSD17B12Q53GQ0 312 aa14□□□□□ -0.17
IRF3-208ENST00000594387 TREML4Q6UXN2 200 aa14□□□□□ -0.17
IRF3-208ENST00000594387 UNQ9370/PRO34162Q6UXP9 181 aa14□□□□□ -0.17
IRF3-208ENST00000594387 SLC16A12Q6ZSM3 486 aa14□□□□□ -0.17
IRF3-208ENST00000594387 PIFOQ8TCI5 191 aa14□□□□□ -0.17
IRF3-208ENST00000594387 KIRREL1Q96J84 757 aa14□□□□□ -0.17
IRF3-208ENST00000594387 CNBD2Q96M20 576 aa14□□□□□ -0.17
IRF3-208ENST00000594387 SELENOIQ9C0D9 397 aa14□□□□□ -0.17
IRF3-208ENST00000594387 DUSP21Q9H596 190 aa14□□□□□ -0.17
IRF3-208ENST00000594387 A0A1W2PP11 408 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 A6NDX4 124 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 FAM90A10PA6NDY2 464 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 FAM90A18PA6NE21 464 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 FAM90A16PA6NEW6 464 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 FAM90A20PA6NIJ5 464 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 FAM90A7PA6NKC0 464 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 FAM90A22PA8MWA6 464 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 FAM90A12PA8MX19 464 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 FAM90A5PA8MXJ8 464 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 FAM90A23PA8MXZ1 464 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 AIPO00170 330 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 PIN1P1O15428 100 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 IGLV1-47P01700 117 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 FAM90A15PP0C7V4 464 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 FAM90A13PP0C7W8 464 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 FAM90A14PP0C7W9 464 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 FAM90A24PP0C7X0 464 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 MGMTP16455 207 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 SRMP19623 302 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 PSMA1P25786 263 aaKnown RBP13.99□□□□□ -0.17
IRF3-208ENST00000594387 LIPKQ5VXJ0 399 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 PRSS48Q7RTY5 328 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 TMEM219Q86XT9 240 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 RFESDQ8TAC1 157 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 PHYHIPQ92561 330 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 RPEQ96AT9 228 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 MMP28Q9H239 520 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 BANF2Q9H503 90 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 ISYNA1Q9NPH2 558 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 ETAA1Q9NY74 926 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 RAB26Q9ULW5 256 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 PEX16Q9Y5Y5 336 aa13.99□□□□□ -0.17
IRF3-208ENST00000594387 J3QR06 171 aa13.98□□□□□ -0.17
IRF3-208ENST00000594387 CHST1O43916 411 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms