RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 SLC38A11Q08AI6 406 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 TRA2AQ13595 282 aaKnown RBP eCLIP3.09□□□□□ -1.92
VMP1-216ENST00000592790 ABHD17BQ5VST6 288 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 CST9LP1Q5W188 147 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 SHISA6Q6ZSJ9 500 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 OR5AS1Q8N127 324 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 TMEM252Q8N6L7 170 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 SLC35G3Q8N808 338 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 CLEC18CQ8NCF0 446 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 BHLHE23Q8NDY6 225 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 OR2M3Q8NG83 312 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 OR10V1Q8NGI7 309 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 OR4A16Q8NH70 328 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 EDARADDQ8WWZ3 215 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 GTF3AQ92664 365 aaKnown RBP3.09□□□□□ -1.92
VMP1-216ENST00000592790 LSM10Q969L4 123 aaKnown RBP3.09□□□□□ -1.92
VMP1-216ENST00000592790 VOPP1Q96AW1 172 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 BOD1Q96IK1 185 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 FOXB1Q99853 325 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 PLA2G2FQ9BZM2 168 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 EGLN1Q9GZT9 426 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.09□□□□□ -1.92
VMP1-216ENST00000592790 DOK5Q9P104 306 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 LHFPL6Q9Y693 200 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 DNAH12Q6ZR08 3092 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 ZNF891A8MT65 544 aaPredicted RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 PRR32B1ATL7 298 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 PIAS2O75928 621 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 VENTXO95231 258 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 SRD5A2P31213 254 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 TAS2R45P59539 299 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 SELENOVP59797 346 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 IL11RAQ14626 422 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 ACSF3Q4G176 576 aaPredicted RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 SPANXN5Q5MJ07 72 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 ZNF705AQ6ZN79 300 aaPredicted RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 MRPL52Q86TS9 123 aaKnown RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 TMEM183AQ8IXX5 376 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 ZNF611Q8N823 705 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 DMBX1Q8NFW5 382 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 OR51H1Q8NH63 302 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 AP1S3Q96PC3 154 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 TPSD1Q9BZJ3 242 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 UBE2ZQ9H832 354 aaPredicted RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 SRD5A3Q9H8P0 318 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 WDR54Q9H977 334 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 PATZ1Q9HBE1 687 aaKnown RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 OCIAD1Q9NX40 245 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 P4HTMQ9NXG6 502 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 IGLV3-32A0A0A0MS00 114 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 TRAV1-1A0A0B4J248 108 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 LOC102723971A0A1B0GUV8 181 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 A0A1W2PPQ1 181 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 NKX2-6A6NCS4 301 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 MSGN1A6NI15 193 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 SLC31A2O15432 143 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 SPRY1O43609 319 aaPredicted RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 CHST1O43916 411 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 MPDU1O75352 247 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 NDUFS6O75380 124 aaKnown RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 HRASP01112 189 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 KRASP01116 189 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 IGLV3-19P01714 112 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 HIST1H1BP16401 226 aaKnown RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 ASCL1P50553 236 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 ELLP55199 621 aaPredicted RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 TAS2R60P59551 318 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 LCN2P80188 198 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 SLC10A1Q14973 349 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 TESK1Q15569 626 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 TBC1D28Q2M2D7 210 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 PLAC9Q5JTB6 97 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 SAPCD1Q5SSQ6 148 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 RIPPLY2Q5TAB7 128 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 PRAMEF20Q5VT98 475 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 HEPN1Q6WQI6 88 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 NUFIP2Q7Z417 695 aaKnown RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 S100A7AQ86SG5 101 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 SIGLECL1Q8N7X8 197 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 SLC24A4Q8NFF2 622 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 OR5A2Q8NGI9 324 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 C22orf15Q8WYQ4 148 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 RPUSD4Q96CM3 377 aaKnown RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 ADGRG7Q96K78 797 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 CLUHP3Q96NS8 147 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 FOXQ1Q9C009 403 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 WDR13Q9H1Z4 485 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 CHODLQ9H9P2 273 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 TMEM9BQ9NQ34 198 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 OR2W1Q9Y3N9 320 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 TRAPPC1Q9Y5R8 145 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 SPTA1P02549 2419 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 TRAV9-1A0A075B6T8 112 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 FAM166BA8MTA8 275 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 H0YIZ8 118 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 TCAPO15273 167 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 TUSC2O75896 110 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 NXPH2O95156 264 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 ONECUT2O95948 504 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 KIR2DS2P43631 304 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms