RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 MEX3BQ6ZN04 569 aaKnown RBP13.37□□□□□ -0.27
MBD1-227ENST00000592060 ZNF565Q8N9K5 539 aa13.37□□□□□ -0.27
MBD1-227ENST00000592060 SPERTQ8NA61 448 aa13.37□□□□□ -0.27
MBD1-227ENST00000592060 PLSCR4Q9NRQ2 329 aa13.37□□□□□ -0.27
MBD1-227ENST00000592060 DKK4Q9UBT3 224 aa13.37□□□□□ -0.27
MBD1-227ENST00000592060 ZDHHC8Q9ULC8 765 aa13.37□□□□□ -0.27
MBD1-227ENST00000592060 NSG2Q9Y328 171 aa13.37□□□□□ -0.27
MBD1-227ENST00000592060 RAB19A4D1S5 217 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 AHRRA9YTQ3 701 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 AGFG2O95081 481 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 ZNF44P15621 663 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 RCC1P18754 421 aaPredicted RBP13.36□□□□□ -0.27
MBD1-227ENST00000592060 MDH2P40926 338 aaKnown RBP13.36□□□□□ -0.27
MBD1-227ENST00000592060 EIF5AP63241 154 aaKnown RBP13.36□□□□□ -0.27
MBD1-227ENST00000592060 ZNF169Q14929 603 aaPredicted RBP13.36□□□□□ -0.27
MBD1-227ENST00000592060 SHEQ5VZ18 495 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 ZNF324BQ6AW86 544 aaPredicted RBP13.36□□□□□ -0.27
MBD1-227ENST00000592060 KLF14Q8TD94 323 aaPredicted RBP13.36□□□□□ -0.27
MBD1-227ENST00000592060 MARC2Q969Z3 335 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 ZC4H2Q9NQZ6 224 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 CCL28Q9NRJ3 127 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 TREM2Q9NZC2 230 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 EP300Q09472 2414 aaPredicted RBP13.36□□□□□ -0.27
MBD1-227ENST00000592060 TMEM210A6NLX4 147 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 H0YL77 283 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 SLC33A1O00400 549 aaPredicted RBP13.36□□□□□ -0.27
MBD1-227ENST00000592060 TM4SF5O14894 197 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 TNFSF13O75888 250 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 OR2H2O95918 312 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 CEACAM1P13688 526 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 MST1LQ2TV78 715 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 SPIN3Q5JUX0 258 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 UQCC3Q6UW78 93 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 H1FOOQ8IZA3 346 aaPredicted RBP13.36□□□□□ -0.27
MBD1-227ENST00000592060 ZADH2Q8N4Q0 377 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 BPIFCQ8NFQ6 507 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 PLPPR1Q8TBJ4 325 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 ERGIC1Q969X5 290 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 TAF9BQ9HBM6 251 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 ZFP57Q9NU63 452 aa13.36□□□□□ -0.27
MBD1-227ENST00000592060 NPIPB11E5RHQ5 1161 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 WDR1O75083 606 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 CDS2O95674 445 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 CGAP01215 116 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 UCP1P25874 307 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 HOXC12P31275 282 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 TMEM33P57088 247 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 ZNF146Q15072 292 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 OR8G1Q15617 311 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 IGFL3Q6UXB1 125 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 ZNF497Q6ZNH5 498 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 MOB1BQ7L9L4 216 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 SELENOHQ8IZQ5 122 aaKnown RBP13.35□□□□□ -0.27
MBD1-227ENST00000592060 DMBX1Q8NFW5 382 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 LILRB1Q8NHL6 650 aaPredicted RBP13.35□□□□□ -0.27
MBD1-227ENST00000592060 BSCL2Q96G97 398 aaPredicted RBP13.35□□□□□ -0.27
MBD1-227ENST00000592060 MS4A7Q9GZW8 240 aaPredicted RBP13.35□□□□□ -0.27
MBD1-227ENST00000592060 C11orf1Q9H5F2 150 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 LPAR3Q9UBY5 353 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 POMT1Q9Y6A1 747 aa13.35□□□□□ -0.27
MBD1-227ENST00000592060 NKX2-6A6NCS4 301 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 SIRPB1O00241 398 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 CDIPTO14735 213 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 HSD17B6O14756 317 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 MLNRO43193 412 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 IGLV1-44P01699 117 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 ACAA1P09110 424 aaPredicted RBP13.34□□□□□ -0.27
MBD1-227ENST00000592060 CECR9P0C854 216 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 SEM1Q6ZVN7 128 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 CXorf67Q86X51 503 aaPredicted RBP13.34□□□□□ -0.27
MBD1-227ENST00000592060 STARD4Q96DR4 205 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 HES4Q9HCC6 221 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 COQ3Q9NZJ6 369 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 PURGQ9UJV8 347 aaKnown RBP13.34□□□□□ -0.27
MBD1-227ENST00000592060 RCL1Q9Y2P8 373 aaKnown RBP13.34□□□□□ -0.27
MBD1-227ENST00000592060 UBE2J1Q9Y385 318 aaPredicted RBP13.34□□□□□ -0.27
MBD1-227ENST00000592060 DUXBA0A1W2PPF3 345 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 MBD3L4A6NDZ8 208 aaPredicted RBP13.34□□□□□ -0.27
MBD1-227ENST00000592060 MBD3L3A6NE82 208 aaPredicted RBP13.34□□□□□ -0.27
MBD1-227ENST00000592060 MBD3L5A6NJ08 208 aaPredicted RBP13.34□□□□□ -0.27
MBD1-227ENST00000592060 ST8SIA3O43173 380 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 GPR137BO60478 399 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 P2RY1P47900 373 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 BOLLQ8N9W6 283 aaKnown RBP13.34□□□□□ -0.27
MBD1-227ENST00000592060 ZNF610Q8N9Z0 462 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 OR8G5Q8NG78 346 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 MBD3L2Q8NHZ7 208 aaPredicted RBP13.34□□□□□ -0.27
MBD1-227ENST00000592060 ARL11Q969Q4 196 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 SMIM8Q96KF7 97 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 GPHA2Q96T91 129 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 ARV1Q9H2C2 271 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 PLA2G2EQ9NZK7 142 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 OR2W1Q9Y3N9 320 aa13.34□□□□□ -0.27
MBD1-227ENST00000592060 ZFHX2Q9C0A1 2572 aaPredicted RBP13.33□□□□□ -0.28
MBD1-227ENST00000592060 H0Y980 276 aa13.33□□□□□ -0.28
MBD1-227ENST00000592060 JTBO76095 146 aa13.33□□□□□ -0.28
MBD1-227ENST00000592060 NXPH2O95156 264 aa13.33□□□□□ -0.28
MBD1-227ENST00000592060 GPR157Q5UAW9 335 aa13.33□□□□□ -0.28
MBD1-227ENST00000592060 ZNF695Q8IW36 515 aa13.33□□□□□ -0.28
MBD1-227ENST00000592060 OR10J5Q8NHC4 309 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms