RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 GDNFP39905 211 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 KCNJ3P48549 501 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 KRTAP10-3P60369 221 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 FABP5Q01469 135 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 EMX1Q04741 257 aaPredicted RBP11.29□□□□□ -0.6
CLIP3-205ENST00000592017 LY6EQ16553 131 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 LTC4SQ16873 150 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 LRRC75BQ2VPJ9 315 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 ZNF626Q68DY1 528 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 HEPN1Q6WQI6 88 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 LYPD6Q86Y78 171 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 TMEM104Q8NE00 496 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 OR11H6Q8NGC7 330 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 WFDC12Q8WWY7 111 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 CORO2AQ92828 525 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 FOXRED1Q96CU9 486 aaPredicted RBP11.29□□□□□ -0.6
CLIP3-205ENST00000592017 SSX3Q99909 188 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 IFT22Q9H7X7 185 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 TBL2Q9Y4P3 447 aaKnown RBP11.29□□□□□ -0.6
CLIP3-205ENST00000592017 A0A1B0GUS0 222 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 TMEM30CPA0ZSE6 113 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 ZNF729A6NN14 1252 aaPredicted RBP11.28□□□□□ -0.6
CLIP3-205ENST00000592017 ARL6IP5O75915 188 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 MPIG6BO95866 241 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 PSMB9P28065 219 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 FAM189A2Q15884 450 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 SSX1Q16384 188 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 C17orf58Q2M2W7 97 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 OLFML2AQ68BL7 652 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 DHRS7BQ6IAN0 325 aaPredicted RBP11.28□□□□□ -0.6
CLIP3-205ENST00000592017 OR52W1Q6IF63 320 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 GDPGP1Q6ZNW5 385 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 DYNAPQ8N1N2 210 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 ABHD12Q8N2K0 398 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 OR5R1Q8NH85 324 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 MRPS24Q96EL2 167 aaKnown RBP11.28□□□□□ -0.6
CLIP3-205ENST00000592017 CST11Q9H112 138 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 KCNK15Q9H427 330 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 CALYQ9NYX4 217 aa11.28□□□□□ -0.6
CLIP3-205ENST00000592017 KBTBD11-OT1A0A1B0GTJ5 212 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 MRPS14O60783 128 aaKnown RBP11.27□□□□□ -0.61
CLIP3-205ENST00000592017 UBBP0CG47 229 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 HTR2CP28335 458 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 SSTR5P35346 364 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 RPL15P61313 204 aaKnown RBP11.27□□□□□ -0.61
CLIP3-205ENST00000592017 P2RY14Q15391 338 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 SSX2Q16385 188 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 SLC35E4Q6ICL7 350 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 OR10K2Q6IF99 312 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 RAB12Q6IQ22 244 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 SPARTQ8N0X7 666 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 ZNF565Q8N9K5 539 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 LINC01006Q8NI28 216 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 CCDC107Q8WV48 283 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 Q96M66 194 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 MEGF9Q9H1U4 602 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 PLGRKTQ9HBL7 147 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 ZNF286AQ9HBT8 521 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 SPACA1Q9HBV2 294 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 ABCB10Q9NRK6 738 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 ETAA1Q9NY74 926 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 GHRLQ9UBU3 117 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 AK6Q9Y3D8 172 aaKnown RBP11.27□□□□□ -0.61
CLIP3-205ENST00000592017 HILPDAQ9Y5L2 63 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 PEX16Q9Y5Y5 336 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 VWFP04275 2813 aa11.27□□□□□ -0.61
CLIP3-205ENST00000592017 FAM90A8PA6NJQ4 464 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 MCRIP1C9JLW8 97 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 AIPO00170 330 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 TOR1AO14656 332 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 IL1AP01583 271 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 IGHV3-7P01780 117 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 VSIG8P0DPA2 414 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 RBM39Q14498 530 aaKnown RBP11.26□□□□□ -0.61
CLIP3-205ENST00000592017 NKAPLQ5M9Q1 402 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 C1orf100Q5SVJ3 147 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 LDLRAD2Q5SZI1 272 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 MINOS1Q5TGZ0 78 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 Q6ZSV7 163 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 OR4P4Q8NGL7 312 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 OR6M1Q8NGM8 313 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 RFESDQ8TAC1 157 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 UBALD1Q8TB05 177 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 ZNF596Q8TC21 504 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 MALSU1Q96EH3 234 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 KIRREL1Q96J84 757 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 TMEM59Q9BXS4 323 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 YTHDF1Q9BYJ9 559 aaKnown RBP11.26□□□□□ -0.61
CLIP3-205ENST00000592017 NDUFB11Q9NX14 153 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 IDI2-AS1Q9NZ38 188 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 RCC2Q9P258 522 aaKnown RBP11.26□□□□□ -0.61
CLIP3-205ENST00000592017 MINOS1-NBL1R4GNA1 71 aa11.26□□□□□ -0.61
CLIP3-205ENST00000592017 UBE2QL1A1L167 161 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 FAM90A10PA6NDY2 464 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 FAM90A18PA6NE21 464 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 FAM90A16PA6NEW6 464 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 FAM90A20PA6NIJ5 464 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 FAM90A7PA6NKC0 464 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 FAM90A22PA8MWA6 464 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 FAM90A12PA8MX19 464 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms