RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CFHR4Q92496 578 aa7.67□□□□□ -1.18
BRCA1-226ENST00000591534 TMEM203Q969S6 136 aa7.67□□□□□ -1.18
BRCA1-226ENST00000591534 SPSB1Q96BD6 273 aa7.67□□□□□ -1.18
BRCA1-226ENST00000591534 SEH1LQ96EE3 360 aa7.67□□□□□ -1.18
BRCA1-226ENST00000591534 CEP19Q96LK0 163 aa7.67□□□□□ -1.18
BRCA1-226ENST00000591534 UQCC2Q9BRT2 126 aa7.67□□□□□ -1.18
BRCA1-226ENST00000591534 WDR12Q9GZL7 423 aaKnown RBP7.67□□□□□ -1.18
BRCA1-226ENST00000591534 WDR13Q9H1Z4 485 aa7.67□□□□□ -1.18
BRCA1-226ENST00000591534 TMEM138Q9NPI0 162 aa7.67□□□□□ -1.18
BRCA1-226ENST00000591534 ABCB10Q9NRK6 738 aa7.67□□□□□ -1.18
BRCA1-226ENST00000591534 SLC7A11Q9UPY5 501 aa7.67□□□□□ -1.18
BRCA1-226ENST00000591534 WNK1Q9H4A3 2382 aa7.67□□□□□ -1.18
BRCA1-226ENST00000591534 LOC107986453A0A1B0GWG9 222 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 ZNF732B4DXR9 585 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 MAGEB4O15481 346 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-226ENST00000591534 MPIG6BO95866 241 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 LPLP06858 475 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 UBBP0CG47 229 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 SELLP14151 372 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 RAB3AP20336 220 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 PTBP1P26599 531 aaKnown RBP eCLIP7.66□□□□□ -1.181e-7■■■■■ 45.2
BRCA1-226ENST00000591534 GPM6AP51674 278 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 VBP1P61758 197 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 RPS25P62851 125 aaKnown RBP7.66□□□□□ -1.18
BRCA1-226ENST00000591534 RPL31P62899 125 aaKnown RBP7.66□□□□□ -1.18
BRCA1-226ENST00000591534 PRB3Q04118 309 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-226ENST00000591534 GPR176Q14439 515 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 ARL6IP1Q15041 203 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 SLC16A12Q6ZSM3 486 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 CALHM1Q8IU99 346 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 PNKDQ8N490 385 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 ZNF561Q8N587 486 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 ZNRF1Q8ND25 227 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 MCFD2Q8NI22 146 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 MRAPQ8TCY5 172 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 PHF21AQ96BD5 680 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 SDSLQ96GA7 329 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 DERL3Q96Q80 235 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 S100A13Q99584 98 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 NKX3-1Q99801 234 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-226ENST00000591534 PDCD1LG2Q9BQ51 273 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 OR51E2Q9H255 320 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 RHOFQ9HBH0 211 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 NECAP2Q9NVZ3 263 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 POLDIP2Q9Y2S7 368 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 ETV7Q9Y603 341 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 V9GY05 133 aa7.66□□□□□ -1.18
BRCA1-226ENST00000591534 PRKDCP78527 4128 aaKnown RBP7.65□□□□□ -1.18
BRCA1-226ENST00000591534 IGKV1D-17A0A075B6S4 117 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 ZNF780AO75290 641 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-226ENST00000591534 SRSF10O75494 262 aaKnown RBP7.65□□□□□ -1.18
BRCA1-226ENST00000591534 CDRT1O95170 752 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 CYB5AP00167 134 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 CALCBP10092 127 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 PSG2P11465 335 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 BMXP51813 675 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 LOXL3P58215 753 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 ZNF45Q02386 682 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 TOR2AQ5JU69 321 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 Q6ZSR3 168 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 NDUFA11Q86Y39 141 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 ZNF573Q86YE8 665 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 C11orf44Q8N8P7 122 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 DNAAF1Q8NEP3 725 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 OR13D1Q8NGV5 346 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 PPP1R35Q8TAP8 253 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 DYNC2LI1Q8TCX1 351 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 LYZL4Q96KX0 146 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 OR14A2Q96R54 314 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 CENPOQ9BU64 300 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 PRSS22Q9GZN4 317 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 FGF23Q9GZV9 251 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-226ENST00000591534 OR51I2Q9H344 312 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 ZCCHC4Q9H5U6 513 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 PALMDQ9NP74 551 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 SIGLEC9Q9Y336 463 aa7.65□□□□□ -1.18
BRCA1-226ENST00000591534 TBL2Q9Y4P3 447 aaKnown RBP7.65□□□□□ -1.18
BRCA1-226ENST00000591534 TRBV5-7A0A0A0MS05 114 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 A0A0A6YYH2 397 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 METTL21EPA6NDL7 271 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 A6NJ64 397 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 VGLL3A8MV65 326 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 E9PI62 339 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 AIPO00170 330 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 SULT1B1O43704 296 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 LALBAP00709 142 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 TTRP02766 147 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 ACKR3P25106 362 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 BDKRB2P30411 391 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 PRDX2P32119 198 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 DLX1P56177 255 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 NANOS3P60323 173 aaKnown RBP7.64□□□□□ -1.19
BRCA1-226ENST00000591534 NCS1P62166 190 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 LSM3P62310 102 aaKnown RBP7.64□□□□□ -1.19
BRCA1-226ENST00000591534 PITPNAQ00169 270 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 NSUN5P1Q3KNT7 163 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 DMRTC1Q5HYR2 192 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 CLVS2Q5SYC1 327 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 PLCXD3Q63HM9 321 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 RAB12Q6IQ22 244 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms