RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 EPHA1P21709 976 aa17.19■□□□□ 0.34
CIRBP-229ENST00000590704 SRP14P37108 136 aaKnown RBP17.19■□□□□ 0.34
CIRBP-229ENST00000590704 KCNJ3P48549 501 aa17.19■□□□□ 0.34
CIRBP-229ENST00000590704 VBP1P61758 197 aa17.19■□□□□ 0.34
CIRBP-229ENST00000590704 MOGAT2Q3SYC2 334 aa17.19■□□□□ 0.34
CIRBP-229ENST00000590704 TIMM50Q3ZCQ8 353 aa17.19■□□□□ 0.34
CIRBP-229ENST00000590704 PLAC9Q5JTB6 97 aa17.19■□□□□ 0.34
CIRBP-229ENST00000590704 PNKDQ8N490 385 aa17.19■□□□□ 0.34
CIRBP-229ENST00000590704 BARHL1Q9BZE3 327 aa17.19■□□□□ 0.34
CIRBP-229ENST00000590704 METTL8Q9H825 291 aaKnown RBP17.19■□□□□ 0.34
CIRBP-229ENST00000590704 LINC00574Q9H8X3 128 aa17.19■□□□□ 0.34
CIRBP-229ENST00000590704 KCNK7Q9Y2U2 307 aa17.19■□□□□ 0.34
CIRBP-229ENST00000590704 UBE2J1Q9Y385 318 aaPredicted RBP17.19■□□□□ 0.34
CIRBP-229ENST00000590704 GLAP06280 429 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 LDLRAD2Q5SZI1 272 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 C6orf201Q7Z4U5 140 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 C5orf24Q7Z6I8 188 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 PDZD9Q8IXQ8 264 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 DAPK2Q9UIK4 370 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 IGHV1-69DA0A0B4J2H0 117 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 RAB27BO00194 218 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 IGHV1-69P01742 117 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 IGHV1-8P0DP01 117 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 SNRPBP14678 240 aaKnown RBP17.18■□□□□ 0.34
CIRBP-229ENST00000590704 GPR107Q5VW38 600 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 OR5H6Q8NGV6 325 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 ZNF714Q96N38 554 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 FAAP24Q9BTP7 215 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 PRDM13Q9H4Q3 707 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 TAS2R3Q9NYW6 316 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 RAB22AQ9UL26 194 aa17.18■□□□□ 0.34
CIRBP-229ENST00000590704 UBE2QL1A1L167 161 aa17.17■□□□□ 0.34
CIRBP-229ENST00000590704 NPIPB11E5RHQ5 1161 aa17.17■□□□□ 0.34
CIRBP-229ENST00000590704 RBP4P02753 201 aa17.17■□□□□ 0.34
CIRBP-229ENST00000590704 CMTM4Q8IZR5 234 aa17.17■□□□□ 0.34
CIRBP-229ENST00000590704 PTX4Q96A99 478 aa17.17■□□□□ 0.34
CIRBP-229ENST00000590704 SPACA1Q9HBV2 294 aa17.17■□□□□ 0.34
CIRBP-229ENST00000590704 FBN1P35555 2871 aaKnown RBP17.16■□□□□ 0.34
CIRBP-229ENST00000590704 MEIKINA0A087WXM9 373 aa17.16■□□□□ 0.34
CIRBP-229ENST00000590704 C15orf65H3BRN8 121 aa17.16■□□□□ 0.34
CIRBP-229ENST00000590704 IL1AP01583 271 aa17.16■□□□□ 0.34
CIRBP-229ENST00000590704 RAB6AP20340 208 aa17.16■□□□□ 0.34
CIRBP-229ENST00000590704 BLVRBP30043 206 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-229ENST00000590704 VEGFCP49767 419 aa17.16■□□□□ 0.34
CIRBP-229ENST00000590704 OLFML2AQ68BL7 652 aa17.16■□□□□ 0.34
CIRBP-229ENST00000590704 ZNF782Q6ZMW2 699 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-229ENST00000590704 C17orf50Q8WW18 174 aa17.16■□□□□ 0.34
CIRBP-229ENST00000590704 SLC6A7Q99884 636 aa17.16■□□□□ 0.34
CIRBP-229ENST00000590704 MDFIC2A0A1B0GVS7 189 aa17.15■□□□□ 0.34
CIRBP-229ENST00000590704 MCRIP1C9JLW8 97 aa17.15■□□□□ 0.34
CIRBP-229ENST00000590704 OMGP23515 440 aa17.15■□□□□ 0.34
CIRBP-229ENST00000590704 RPL5P46777 297 aaKnown RBP17.15■□□□□ 0.34
CIRBP-229ENST00000590704 UBE2E1P51965 193 aa17.15■□□□□ 0.34
CIRBP-229ENST00000590704 HEPN1Q6WQI6 88 aa17.15■□□□□ 0.34
CIRBP-229ENST00000590704 TEX29Q8N6K0 151 aa17.15■□□□□ 0.34
CIRBP-229ENST00000590704 ESM1Q9NQ30 184 aa17.15■□□□□ 0.34
CIRBP-229ENST00000590704 OR6C3Q9NZP0 311 aa17.15■□□□□ 0.34
CIRBP-229ENST00000590704 HSF4Q9ULV5 492 aa17.15■□□□□ 0.34
CIRBP-229ENST00000590704 ATRQ13535 2644 aa17.15■□□□□ 0.34
CIRBP-229ENST00000590704 TRGV10A0A0A0MS01 117 aa17.14■□□□□ 0.33
CIRBP-229ENST00000590704 KBTBD11-OT1A0A1B0GTJ5 212 aa17.14■□□□□ 0.33
CIRBP-229ENST00000590704 FUOMA2VDF0 154 aa17.14■□□□□ 0.33
CIRBP-229ENST00000590704 SRSF2Q01130 221 aaKnown RBP17.14■□□□□ 0.33
CIRBP-229ENST00000590704 GPR157Q5UAW9 335 aa17.14■□□□□ 0.33
CIRBP-229ENST00000590704 FAM53AQ6NSI3 398 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-229ENST00000590704 GPR141Q7Z602 305 aa17.14■□□□□ 0.33
CIRBP-229ENST00000590704 MRPL30Q8TCC3 161 aaKnown RBP17.14■□□□□ 0.33
CIRBP-229ENST00000590704 LGALS14Q8TCE9 139 aa17.14■□□□□ 0.33
CIRBP-229ENST00000590704 MRGPRDQ8TDS7 321 aa17.14■□□□□ 0.33
CIRBP-229ENST00000590704 SLC25A46Q96AG3 418 aa17.14■□□□□ 0.33
CIRBP-229ENST00000590704 SLC25A38Q96DW6 304 aa17.14■□□□□ 0.33
CIRBP-229ENST00000590704 ARHGAP5-AS1Q96IT6 56 aa17.14■□□□□ 0.33
CIRBP-229ENST00000590704 URM1Q9BTM9 101 aaKnown RBP17.14■□□□□ 0.33
CIRBP-229ENST00000590704 PECRQ9BY49 303 aa17.14■□□□□ 0.33
CIRBP-229ENST00000590704 MBNL3Q9NUK0 354 aaKnown RBP17.14■□□□□ 0.33
CIRBP-229ENST00000590704 ETAA1Q9NY74 926 aa17.14■□□□□ 0.33
CIRBP-229ENST00000590704 A0A1W2PRD5 423 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 A0A1W2PRF3 423 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 A0A1W2PRM7 423 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 TMEM30CPA0ZSE6 113 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 ZNF729A6NN14 1252 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-229ENST00000590704 NAPSAO96009 420 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 RCC1P18754 421 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-229ENST00000590704 CDK2P24941 298 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 SSTR5P35346 364 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 BPIFB3P59826 476 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 BLMHQ13867 455 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 RBM39Q14498 530 aaKnown RBP17.13■□□□□ 0.33
CIRBP-229ENST00000590704 DEFB112Q30KQ8 113 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 NKAPLQ5M9Q1 402 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 PRAMEF5Q5TYX0 476 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 ZNF880Q6PDB4 577 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 OR4K15Q8NH41 348 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 CCDC107Q8WV48 283 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 KIRREL1Q96J84 757 aa17.13■□□□□ 0.33
CIRBP-229ENST00000590704 HDHD3Q9BSH5 251 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-229ENST00000590704 ELF5Q9UKW6 265 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-229ENST00000590704 A0A0U1RQK1 487 aa17.12■□□□□ 0.33
CIRBP-229ENST00000590704 A0A1W2PPH5 198 aa17.12■□□□□ 0.33
CIRBP-229ENST00000590704 ODF3BA8MYP8 253 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms