RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 RAB12Q6IQ22 244 aa9.69□□□□□ -0.86
LIG3-213ENST00000590630 OR11H6Q8NGC7 330 aa9.69□□□□□ -0.86
LIG3-213ENST00000590630 PLPPR1Q8TBJ4 325 aa9.69□□□□□ -0.86
LIG3-213ENST00000590630 FAM46BQ96A09 425 aa9.69□□□□□ -0.86
LIG3-213ENST00000590630 GFI1Q99684 422 aa9.69□□□□□ -0.86
LIG3-213ENST00000590630 TMEM59Q9BXS4 323 aa9.69□□□□□ -0.86
LIG3-213ENST00000590630 TMEM133Q9H2Q1 129 aa9.69□□□□□ -0.86
LIG3-213ENST00000590630 DPAGT1Q9H3H5 408 aa9.69□□□□□ -0.86
LIG3-213ENST00000590630 ZNRD1Q9P1U0 126 aa9.69□□□□□ -0.86
LIG3-213ENST00000590630 AK6Q9Y3D8 172 aaKnown RBP9.69□□□□□ -0.86
LIG3-213ENST00000590630 DNHD1Q96M86 4753 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 KBTBD11-OT1A0A1B0GTJ5 212 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 TMEM30CPA0ZSE6 113 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 ODF3BA8MYP8 253 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 PDCD5O14737 125 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 MPIG6BO95866 241 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 GLAP06280 429 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 ARSBP15848 533 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 FUT3P21217 361 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 CDK2P24941 298 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 NEDD8Q15843 81 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 RAB11BQ15907 218 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 PRAMEF5Q5TYX0 476 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 ZNF626Q68DY1 528 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 C16orf87Q6PH81 154 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 OR2W3Q7Z3T1 314 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 BEND2Q8NDZ0 799 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 NEK7Q8TDX7 302 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 CLEC7AQ9BXN2 247 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 LINC00574Q9H8X3 128 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 VCX3AQ9NNX9 186 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 STUB1Q9UNE7 303 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 TBL2Q9Y4P3 447 aaKnown RBP9.68□□□□□ -0.86
LIG3-213ENST00000590630 V9GY05 133 aa9.68□□□□□ -0.86
LIG3-213ENST00000590630 A0A087WXM4 84 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 IGHV2-26A0A0B4J1V2 119 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 BTBD17A6NE02 478 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 TMEM14DPA8MWL7 114 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 PDCD6O75340 191 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 CA11O75493 328 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 MMP23AO75900 390 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 IGHV4-59P01825 116 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 ARG1P05089 322 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 CGB3P0DN86 165 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 CGB7P0DN87 165 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 GZMHP20718 246 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 CFPP27918 469 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 CD34P28906 385 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 RPL15P61313 204 aaKnown RBP9.67□□□□□ -0.86
LIG3-213ENST00000590630 RPS27AP62979 156 aaKnown RBP9.67□□□□□ -0.86
LIG3-213ENST00000590630 QRFPP83859 136 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 UNC119Q13432 240 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 AANATQ16613 207 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 C17orf58Q2M2W7 97 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 C22orf42Q6IC83 251 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 BRICD5Q6PL45 260 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 ZNF497Q6ZNH5 498 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 RTN4RL2Q86UN3 420 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 TSPAN14Q8NG11 270 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 OR13A1Q8NGR1 328 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 OR5R1Q8NH85 324 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 GCDHQ92947 438 aaPredicted RBP9.67□□□□□ -0.86
LIG3-213ENST00000590630 AJUBAQ96IF1 538 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 TM2D1Q9BX74 207 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 CHIAQ9BZP6 476 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 MEGF9Q9H1U4 602 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 TXNL4BQ9NX01 149 aaKnown RBP9.67□□□□□ -0.86
LIG3-213ENST00000590630 CALYQ9NYX4 217 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 FBLN5Q9UBX5 448 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 SSR3Q9UNL2 185 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 PEX16Q9Y5Y5 336 aa9.67□□□□□ -0.86
LIG3-213ENST00000590630 A0A087X0M5 115 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 A0A1B0GX30 115 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 TMEM89A2RUT3 159 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 AIPO00170 330 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 IL1AP01583 271 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 RAB3BP20337 219 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 OMGP23515 440 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 DYNC1I2Q13409 638 aaKnown RBP9.66□□□□□ -0.86
LIG3-213ENST00000590630 P2RY14Q15391 338 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 MINOS1Q5TGZ0 78 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 SIGIRRQ6IA17 410 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 OR10K2Q6IF99 312 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 GAPTQ8N292 157 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 ABHD12Q8N2K0 398 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 OR10A7Q8NGE5 316 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 ZNF596Q8TC21 504 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 MRGPRDQ8TDS7 321 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 C17orf50Q8WW18 174 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 DYRK2Q92630 601 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 FAM3DQ96BQ1 224 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 MALSU1Q96EH3 234 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 KIRREL1Q96J84 757 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 NEDD4LQ96PU5 975 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 URM1Q9BTM9 101 aaKnown RBP9.66□□□□□ -0.86
LIG3-213ENST00000590630 KCNK15Q9H427 330 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 ZNF696Q9H7X3 374 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 ETAA1Q9NY74 926 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 STEAP1Q9UHE8 339 aa9.66□□□□□ -0.86
LIG3-213ENST00000590630 MINOS1-NBL1R4GNA1 71 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms