RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TMEM41BQ5BJD5 291 aa13.15□□□□□ -0.3
CIRBP-228ENST00000590347 LIAT1Q6ZQX7 453 aa13.15□□□□□ -0.3
CIRBP-228ENST00000590347 DTX1Q86Y01 620 aa13.15□□□□□ -0.3
CIRBP-228ENST00000590347 ODF3L1Q8IXM7 274 aa13.15□□□□□ -0.3
CIRBP-228ENST00000590347 TRAPPC1Q9Y5R8 145 aa13.15□□□□□ -0.3
CIRBP-228ENST00000590347 LOC105371242A0A075B767 164 aa13.15□□□□□ -0.3
CIRBP-228ENST00000590347 B4DEV8 164 aa13.15□□□□□ -0.3
CIRBP-228ENST00000590347 CEACAM5P06731 702 aa13.15□□□□□ -0.3
CIRBP-228ENST00000590347 POU3F1Q03052 451 aaPredicted RBP13.15□□□□□ -0.3
CIRBP-228ENST00000590347 OR2T10Q8NGZ9 312 aa13.15□□□□□ -0.3
CIRBP-228ENST00000590347 TSACCQ96A04 125 aaPredicted RBP13.15□□□□□ -0.3
CIRBP-228ENST00000590347 TXN2Q99757 166 aa13.15□□□□□ -0.3
CIRBP-228ENST00000590347 CHST1O43916 411 aa13.15□□□□□ -0.31
CIRBP-228ENST00000590347 CRYABP02511 175 aaKnown RBP13.15□□□□□ -0.31
CIRBP-228ENST00000590347 FCGR2AP12318 317 aa13.15□□□□□ -0.31
CIRBP-228ENST00000590347 CCKARP32238 428 aa13.15□□□□□ -0.31
CIRBP-228ENST00000590347 RPL23P62829 140 aaKnown RBP13.15□□□□□ -0.31
CIRBP-228ENST00000590347 IL13RA2Q14627 380 aa13.15□□□□□ -0.31
CIRBP-228ENST00000590347 EMC4Q5J8M3 183 aa13.15□□□□□ -0.31
CIRBP-228ENST00000590347 ADAMTSL4Q6UY14 1074 aa13.15□□□□□ -0.31
CIRBP-228ENST00000590347 RHBDD1Q8TEB9 315 aa13.15□□□□□ -0.31
CIRBP-228ENST00000590347 C11orf40Q8WZ69 217 aa13.15□□□□□ -0.31
CIRBP-228ENST00000590347 OR10A5Q9H207 317 aa13.15□□□□□ -0.31
CIRBP-228ENST00000590347 GAL3ST2Q9H3Q3 398 aa13.15□□□□□ -0.31
CIRBP-228ENST00000590347 SMDT1Q9H4I9 107 aa13.15□□□□□ -0.31
CIRBP-228ENST00000590347 NKX6-3A6NJ46 265 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 SPRY1O43609 319 aaPredicted RBP13.14□□□□□ -0.31
CIRBP-228ENST00000590347 SMIM10L1P0DMW3 83 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 HIST1H3AP68431 136 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 KMT5CQ86Y97 462 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 SMIM10Q96HG1 83 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 NXF5Q9H1B4 397 aaKnown RBP13.14□□□□□ -0.31
CIRBP-228ENST00000590347 SH2D1BO14796 132 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 RER1O15258 196 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 HOXB2P14652 356 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 FAHP16930 419 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 SLC6A8P48029 635 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 IL24Q13007 206 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 Q5PR19 223 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 OR8B12Q8NGG6 310 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 ZNF519Q8TB69 540 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 MSI2Q96DH6 328 aaKnown RBP13.14□□□□□ -0.31
CIRBP-228ENST00000590347 HDAC8Q9BY41 377 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 S1PR5Q9H228 398 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 CABIN1Q9Y6J0 2220 aa13.14□□□□□ -0.31
CIRBP-228ENST00000590347 UTS2O95399 124 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 ZNF121P58317 390 aaPredicted RBP13.13□□□□□ -0.31
CIRBP-228ENST00000590347 MFAP5Q13361 173 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 KISS1Q15726 138 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 TMEM241Q24JQ0 296 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 COA6Q5JTJ3 125 aaKnown RBP13.13□□□□□ -0.31
CIRBP-228ENST00000590347 Q6ZN92 141 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 MCEMP1Q8IX19 187 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 CMTM2Q8TAZ6 248 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 RBMXL1Q96E39 390 aaKnown RBP13.13□□□□□ -0.31
CIRBP-228ENST00000590347 OR51I2Q9H344 312 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 ANXA10Q9UJ72 324 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 WDFY4Q6ZS81 3184 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 TNFRSF10CO14798 259 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 CDS2O95674 445 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 ISG15P05161 165 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 DUSP3P51452 185 aaPredicted RBP13.13□□□□□ -0.31
CIRBP-228ENST00000590347 ACTL10Q5JWF8 245 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 LDLRAD2Q5SZI1 272 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 TPTE2P1Q5T6R2 138 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 OR4C5Q8NGB2 326 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 ACY3Q96HD9 319 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 PGAM5Q96HS1 289 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 WNT10AQ9GZT5 417 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 TMEM9BQ9NQ34 198 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 PNO1Q9NRX1 252 aaKnown RBP13.13□□□□□ -0.31
CIRBP-228ENST00000590347 TMEM106BQ9NUM4 274 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 OR6C3Q9NZP0 311 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 UBE2J1Q9Y385 318 aaPredicted RBP13.13□□□□□ -0.31
CIRBP-228ENST00000590347 TNFSF13O75888 250 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 PDGFBP01127 241 aaPredicted RBP13.13□□□□□ -0.31
CIRBP-228ENST00000590347 SLC35E2P0CK97 266 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 IAPPP10997 89 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 TDGF1P13385 188 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 IL3RAP26951 378 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 CDKN1BP46527 198 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 SOX8P57073 446 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 ZFYVE21Q9BQ24 234 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 TXNIPQ9H3M7 391 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 Q9N2K0 584 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 CLEC1BQ9P126 229 aa13.13□□□□□ -0.31
CIRBP-228ENST00000590347 ZNF816-ZNF321PA0A0X1KG74 233 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 C1QTNF9BB2RNN3 333 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 H3BML4 177 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 GOSR1O95249 250 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 FRMD6-AS1P0C7T7 363 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 ZNF17P17021 662 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 SPINK2P20155 84 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 KIR2DL1P43626 348 aaPredicted RBP13.12□□□□□ -0.31
CIRBP-228ENST00000590347 SELENOTP62341 195 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 PNRC1Q12796 327 aaPredicted RBP13.12□□□□□ -0.31
CIRBP-228ENST00000590347 EXT1Q16394 746 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 OR4F5Q8NH21 305 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 OR4F4Q96R69 305 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 RAB11FIP5Q9BXF6 653 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms