RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 HTR1DP28221 377 aa13.7□□□□□ -0.22
H3F3B-208ENST00000589599 PRRX1P54821 245 aa13.7□□□□□ -0.22
H3F3B-208ENST00000589599 RELBQ01201 579 aa13.7□□□□□ -0.22
H3F3B-208ENST00000589599 RBM39Q14498 530 aaKnown RBP13.7□□□□□ -0.22
H3F3B-208ENST00000589599 FAM189A2Q15884 450 aa13.7□□□□□ -0.22
H3F3B-208ENST00000589599 RSBN1Q5VWQ0 802 aaPredicted RBP13.7□□□□□ -0.22
H3F3B-208ENST00000589599 SLC35E4Q6ICL7 350 aa13.7□□□□□ -0.22
H3F3B-208ENST00000589599 ZNF367Q7RTV3 350 aa13.7□□□□□ -0.22
H3F3B-208ENST00000589599 LRRTM1Q86UE6 522 aa13.7□□□□□ -0.22
H3F3B-208ENST00000589599 LYPD6Q86Y78 171 aa13.7□□□□□ -0.22
H3F3B-208ENST00000589599 SELENOIQ9C0D9 397 aa13.7□□□□□ -0.22
H3F3B-208ENST00000589599 CST11Q9H112 138 aa13.7□□□□□ -0.22
H3F3B-208ENST00000589599 RAB18Q9NP72 206 aa13.7□□□□□ -0.22
H3F3B-208ENST00000589599 FAM90A10PA6NDY2 464 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 FAM90A18PA6NE21 464 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 FAM90A16PA6NEW6 464 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 FAM90A20PA6NIJ5 464 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 FAM90A7PA6NKC0 464 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 VGLL3A8MV65 326 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 FAM90A22PA8MWA6 464 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 FAM90A12PA8MX19 464 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 FAM90A5PA8MXJ8 464 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 FAM90A23PA8MXZ1 464 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 SC5DO75845 299 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 FAM90A15PP0C7V4 464 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 FAM90A13PP0C7W8 464 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 FAM90A14PP0C7W9 464 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 FAM90A24PP0C7X0 464 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 MGMTP16455 207 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 GZMHP20718 246 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 NFYBP25208 207 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 PAX6P26367 422 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 GP2P55259 537 aaKnown RBP13.69□□□□□ -0.22
H3F3B-208ENST00000589599 GABARAPL2P60520 117 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 TBCEQ15813 527 aaPredicted RBP13.69□□□□□ -0.22
H3F3B-208ENST00000589599 LY6EQ16553 131 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 C17orf58Q2M2W7 97 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 PLA1AQ53H76 456 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 OLFML2AQ68BL7 652 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 LIAT1Q6ZQX7 453 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 OR13A1Q8NGR1 328 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 PLPPR1Q8TBJ4 325 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 CREB3L1Q96BA8 519 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 YTHDF1Q9BYJ9 559 aaKnown RBP13.69□□□□□ -0.22
H3F3B-208ENST00000589599 BANF2Q9H503 90 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 ACOT13Q9NPJ3 140 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 CALYQ9NYX4 217 aa13.69□□□□□ -0.22
H3F3B-208ENST00000589599 RRP15Q9Y3B9 282 aaKnown RBP13.69□□□□□ -0.22
H3F3B-208ENST00000589599 CGB3P0DN86 165 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 CGB7P0DN87 165 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 CD34P28906 385 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 RPS25P62851 125 aaKnown RBP13.68□□□□□ -0.22
H3F3B-208ENST00000589599 C1orf100Q5SVJ3 147 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 RAB12Q6IQ22 244 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 BRICD5Q6PL45 260 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 SVOPQ8N4V2 548 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 DTX3Q8N9I9 347 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 SGMS2Q8NHU3 365 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 MRGPRDQ8TDS7 321 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 LINC00574Q9H8X3 128 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 IDI2-AS1Q9NZ38 188 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 ZNF581Q9P0T4 197 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 DPM3Q9P2X0 92 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 HILPDAQ9Y5L2 63 aa13.68□□□□□ -0.22
H3F3B-208ENST00000589599 FBN3Q75N90 2809 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 A0A087X0M5 115 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 A0A1B0GX30 115 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 LEUTXA8MZ59 168 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 IL1AP01583 271 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 GLAP06280 429 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 FUT3P21217 361 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 GABRA5P31644 462 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 GDNFP39905 211 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 CEACAM3P40198 252 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 ARHGDIBP52566 201 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 BAIAP2L2Q6UXY1 529 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 TMEM91Q6ZNR0 172 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 SLC16A12Q6ZSM3 486 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 DYNAPQ8N1N2 210 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 TMEM104Q8NE00 496 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 OR10A7Q8NGE5 316 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 C16orf95Q9H693 158 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 ZNF286AQ9HBT8 521 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 RCC2Q9P258 522 aaKnown RBP13.67□□□□□ -0.22
H3F3B-208ENST00000589599 PITPNC1Q9UKF7 332 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 RNF114Q9Y508 228 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 PEX16Q9Y5Y5 336 aa13.67□□□□□ -0.22
H3F3B-208ENST00000589599 TRAV39A0A0B4J263 110 aa13.66□□□□□ -0.22
H3F3B-208ENST00000589599 FAM172BPA6NC97 362 aa13.66□□□□□ -0.22
H3F3B-208ENST00000589599 NPIPB11E5RHQ5 1161 aa13.66□□□□□ -0.22
H3F3B-208ENST00000589599 F2RL2O00254 374 aa13.66□□□□□ -0.22
H3F3B-208ENST00000589599 TSPAN9O75954 239 aa13.66□□□□□ -0.22
H3F3B-208ENST00000589599 MT-ND4P03905 459 aa13.66□□□□□ -0.22
H3F3B-208ENST00000589599 HTR2CP28335 458 aa13.66□□□□□ -0.22
H3F3B-208ENST00000589599 RANBP1P43487 201 aa13.66□□□□□ -0.22
H3F3B-208ENST00000589599 RAB13P51153 203 aa13.66□□□□□ -0.22
H3F3B-208ENST00000589599 DYNLT3P51808 116 aa13.66□□□□□ -0.22
H3F3B-208ENST00000589599 FABP5Q01469 135 aa13.66□□□□□ -0.22
H3F3B-208ENST00000589599 EMX1Q04741 257 aaPredicted RBP13.66□□□□□ -0.22
H3F3B-208ENST00000589599 LDLRAD2Q5SZI1 272 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms