RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SP5Q6BEB4 398 aaPredicted RBP15.96■□□□□ 0.14
DDX39A-206ENST00000587730 ZNF818PQ6ZRF7 136 aa15.96■□□□□ 0.14
DDX39A-206ENST00000587730 MRPL21Q7Z2W9 205 aaKnown RBP15.96■□□□□ 0.14
DDX39A-206ENST00000587730 ZFP62Q8NB50 900 aaPredicted RBP15.96■□□□□ 0.14
DDX39A-206ENST00000587730 APOBEC3DQ96AK3 386 aaPredicted RBP15.96■□□□□ 0.14
DDX39A-206ENST00000587730 MUCL1Q96DR8 90 aa15.96■□□□□ 0.14
DDX39A-206ENST00000587730 TVP23CQ96ET8 276 aa15.96■□□□□ 0.14
DDX39A-206ENST00000587730 HIST1H2AAQ96QV6 131 aa15.96■□□□□ 0.14
DDX39A-206ENST00000587730 NIPSNAP3BQ9BS92 247 aa15.96■□□□□ 0.14
DDX39A-206ENST00000587730 A0A1W2PPE2 198 aa15.95■□□□□ 0.14
DDX39A-206ENST00000587730 LRRC3CA6NJW4 275 aa15.95■□□□□ 0.14
DDX39A-206ENST00000587730 MRPL33O75394 65 aaKnown RBP15.95■□□□□ 0.14
DDX39A-206ENST00000587730 IFNA5P01569 189 aa15.95■□□□□ 0.14
DDX39A-206ENST00000587730 OR8U8P0C7N1 319 aa15.95■□□□□ 0.14
DDX39A-206ENST00000587730 PATE4P0C8F1 98 aa15.95■□□□□ 0.14
DDX39A-206ENST00000587730 UBE2KP61086 200 aa15.95■□□□□ 0.14
DDX39A-206ENST00000587730 DAZAP2Q15038 168 aaPredicted RBP15.95■□□□□ 0.14
DDX39A-206ENST00000587730 ACSF3Q4G176 576 aaPredicted RBP15.95■□□□□ 0.14
DDX39A-206ENST00000587730 OR5A2Q8NGI9 324 aa15.95■□□□□ 0.14
DDX39A-206ENST00000587730 SIGLEC12Q96PQ1 595 aa15.95■□□□□ 0.14
DDX39A-206ENST00000587730 NIT2Q9NQR4 276 aa15.95■□□□□ 0.14
DDX39A-206ENST00000587730 GSN-AS1Q9NRJ2 163 aa15.95■□□□□ 0.14
DDX39A-206ENST00000587730 BOKQ9UMX3 212 aaPredicted RBP15.95■□□□□ 0.14
DDX39A-206ENST00000587730 NOSIPQ9Y314 301 aaKnown RBP15.95■□□□□ 0.14
DDX39A-206ENST00000587730 ASCC3Q8N3C0 2202 aaKnown RBP15.95■□□□□ 0.14
DDX39A-206ENST00000587730 KIAA1549Q9HCM3 1950 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 ARG1P05089 322 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 DAOP14920 347 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 BCL3P20749 454 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 NPBWR2P48146 333 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 DYNLT3P51808 116 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 ZNF468Q5VIY5 522 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-206ENST00000587730 NAXEQ8NCW5 288 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 OR56B2PQ8NGI1 322 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 OR13D1Q8NGV5 346 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 SIT1Q9Y3P8 196 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 B4E171 279 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 HSD17B6O14756 317 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 GPR37O15354 613 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 TRAPPC6AO75865 159 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 SCAF4O95104 1147 aaKnown RBP15.94■□□□□ 0.14
DDX39A-206ENST00000587730 TAGLN2P37802 199 aaKnown RBP15.94■□□□□ 0.14
DDX39A-206ENST00000587730 TSPAN7P41732 249 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 PNRC1Q12796 327 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-206ENST00000587730 CXorf66Q5JRM2 361 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-206ENST00000587730 SUMF1Q8NBK3 374 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 FGFBP3Q8TAT2 258 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 TMEM171Q8WVE6 324 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 SLAMF9Q96A28 289 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 RARRES2Q99969 163 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 GLRX2Q9NS18 164 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 WSB1Q9Y6I7 421 aa15.94■□□□□ 0.14
DDX39A-206ENST00000587730 F2RP25116 425 aa15.93■□□□□ 0.14
DDX39A-206ENST00000587730 GDF1P27539 372 aa15.93■□□□□ 0.14
DDX39A-206ENST00000587730 ARR3P36575 388 aa15.93■□□□□ 0.14
DDX39A-206ENST00000587730 HAAOP46952 286 aa15.93■□□□□ 0.14
DDX39A-206ENST00000587730 CYB561P49447 251 aa15.93■□□□□ 0.14
DDX39A-206ENST00000587730 GFRA1P56159 465 aa15.93■□□□□ 0.14
DDX39A-206ENST00000587730 TCEAL6Q6IPX3 200 aa15.93■□□□□ 0.14
DDX39A-206ENST00000587730 RBMS3Q6XE24 437 aaKnown RBP15.93■□□□□ 0.14
DDX39A-206ENST00000587730 SLC16A13Q7RTY0 426 aa15.93■□□□□ 0.14
DDX39A-206ENST00000587730 ZNF429Q86V71 674 aa15.93■□□□□ 0.14
DDX39A-206ENST00000587730 H1FOOQ8IZA3 346 aaPredicted RBP15.93■□□□□ 0.14
DDX39A-206ENST00000587730 CPEB3Q8NE35 698 aaKnown RBP15.93■□□□□ 0.14
DDX39A-206ENST00000587730 NEK7Q8TDX7 302 aa15.93■□□□□ 0.14
DDX39A-206ENST00000587730 RAB39BQ96DA2 213 aa15.93■□□□□ 0.14
DDX39A-206ENST00000587730 A0A1W2PPE3 182 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 NPIPB11E5RHQ5 1161 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 ZNF587BE7ETH6 402 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 F10P00742 488 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 NQO2P16083 231 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 CBR1P16152 277 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 OMGP23515 440 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 ITGA3P26006 1051 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 OR2B8PP59922 312 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 ICAM4Q14773 271 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 WIPI1Q5MNZ9 446 aaPredicted RBP15.92■□□□□ 0.14
DDX39A-206ENST00000587730 ACER2Q5QJU3 275 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 MOB1BQ7L9L4 216 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 PLPPR1Q8TBJ4 325 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 LSM10Q969L4 123 aaKnown RBP15.92■□□□□ 0.14
DDX39A-206ENST00000587730 RNF115Q9Y4L5 304 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 CABIN1Q9Y6J0 2220 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 WDFY4Q6ZS81 3184 aa15.92■□□□□ 0.14
DDX39A-206ENST00000587730 OR5B21A6NL26 309 aa15.91■□□□□ 0.14
DDX39A-206ENST00000587730 DEGS1O15121 323 aa15.91■□□□□ 0.14
DDX39A-206ENST00000587730 CHST1O43916 411 aa15.91■□□□□ 0.14
DDX39A-206ENST00000587730 PGLYRP1O75594 196 aaPredicted RBP15.91■□□□□ 0.14
DDX39A-206ENST00000587730 CNOT4O95628 575 aaKnown RBP15.91■□□□□ 0.14
DDX39A-206ENST00000587730 SERPINA7P05543 415 aa15.91■□□□□ 0.14
DDX39A-206ENST00000587730 SERPINE2P07093 398 aa15.91■□□□□ 0.14
DDX39A-206ENST00000587730 SCTP09683 121 aa15.91■□□□□ 0.14
DDX39A-206ENST00000587730 HOXA5P20719 270 aa15.91■□□□□ 0.14
DDX39A-206ENST00000587730 KIAA0141Q14154 515 aaPredicted RBP15.91■□□□□ 0.14
DDX39A-206ENST00000587730 PPP1R32Q7Z5V6 425 aa15.91■□□□□ 0.14
DDX39A-206ENST00000587730 CLDND2Q8NHS1 167 aa15.91■□□□□ 0.14
DDX39A-206ENST00000587730 TOLLIPQ9H0E2 274 aa15.91■□□□□ 0.14
DDX39A-206ENST00000587730 TMEM242Q9NWH2 141 aa15.91■□□□□ 0.14
DDX39A-206ENST00000587730 B4GALT7Q9UBV7 327 aa15.91■□□□□ 0.14
DDX39A-206ENST00000587730 OR2W1Q9Y3N9 320 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms