RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 LINC01548A6NM66 108 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 FAM90A9PA6NNJ1 464 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 FAM90A12PA8MX19 464 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 FAM90A5PA8MXJ8 464 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 CDRT1O95170 752 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 IGKV1D-33P01593 117 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 IGKV1-33P01594 117 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 FAM90A15PP0C7V4 464 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 FAM90A13PP0C7W8 464 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 FAM90A14PP0C7W9 464 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 FAM90A24PP0C7X0 464 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 FAM106CPP0CH98 169 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 RPL23AP62750 156 aaKnown RBP12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 VAX1Q5SQQ9 334 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 OR2W3Q7Z3T1 314 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 OR52I1Q8NGK6 324 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 RHOFQ9HBH0 211 aa12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 AMMECR1Q9Y4X0 333 aaPredicted RBP12.01□□□□□ -0.49
PRKCSH-204ENST00000587290 TMEM212A6NML5 194 aa12□□□□□ -0.49
PRKCSH-204ENST00000587290 SERPINE3A8MV23 424 aa12□□□□□ -0.49
PRKCSH-204ENST00000587290 OOSP1A8MZH6 123 aa12□□□□□ -0.49
PRKCSH-204ENST00000587290 M0QZK8 103 aa12□□□□□ -0.49
PRKCSH-204ENST00000587290 ATP5HO75947 161 aa12□□□□□ -0.49
PRKCSH-204ENST00000587290 HTR3BO95264 441 aa12□□□□□ -0.49
PRKCSH-204ENST00000587290 CLIC3O95833 236 aa12□□□□□ -0.49
PRKCSH-204ENST00000587290 MADCAM1Q13477 382 aa12□□□□□ -0.49
PRKCSH-204ENST00000587290 ELP2Q6IA86 826 aa12□□□□□ -0.49
PRKCSH-204ENST00000587290 LCNL1Q6ZST4 164 aa12□□□□□ -0.49
PRKCSH-204ENST00000587290 SYS1Q8N2H4 156 aa12□□□□□ -0.49
PRKCSH-204ENST00000587290 KLHL30-AS1Q8NEE0 82 aa12□□□□□ -0.49
PRKCSH-204ENST00000587290 A0A1W2PP11 408 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 NUDT19A8MXV4 375 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 NPIPB11E5RHQ5 1161 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 RAB3AP20336 220 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 C21orf33P30042 268 aaPredicted RBP11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 THBS3P49746 956 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 EGFEM1PQ0D2K5 195 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 IL13RA2Q14627 380 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 RSU1Q15404 277 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 SMN1Q16637 294 aaKnown RBP11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 ZNF529Q6P280 563 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 ZNF565Q8N9K5 539 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 SUMF2Q8NBJ7 301 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 PXT1Q8NFP0 134 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 OR13C5Q8NGS8 318 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 OR10X1Q8NGY0 326 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 APH1BQ8WW43 257 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 MRPL48Q96GC5 212 aaKnown RBP11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 CYYR1Q96J86 154 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 SLC29A1Q99808 456 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 DPCDQ9BVM2 203 aaPredicted RBP11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 JAM3Q9BX67 310 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 BARHL1Q9BZE3 327 aa11.99□□□□□ -0.49
PRKCSH-204ENST00000587290 IGHV3-43A0A0B4J1X8 118 aa11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 HSD17B6O14756 317 aa11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 OR7C1O76099 320 aaPredicted RBP11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 FADS2O95864 444 aaKnown RBP11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 RPSAP08865 295 aaKnown RBP11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 LIMS3P0CW19 117 aa11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 LIMS4P0CW20 117 aa11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 IGHV3-43DP0DP04 118 aa11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 GBX2P52951 348 aaPredicted RBP11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 SLC35E3Q7Z769 313 aa11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 MOB3BQ86TA1 216 aa11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 THNSL2Q86YJ6 484 aa11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 RHOXF1Q8NHV9 184 aa11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 CCDC107Q8WV48 283 aa11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 LINC00574Q9H8X3 128 aa11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 PCDHB16Q9NRJ7 776 aa11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 ST3GAL6Q9Y274 331 aa11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 SIRT4Q9Y6E7 314 aaPredicted RBP11.98□□□□□ -0.49
PRKCSH-204ENST00000587290 MAGEA13PA6NCF6 341 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 SNTNA6NMZ2 147 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 GEMIN2O14893 280 aaKnown RBP11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 DUS4LO95620 317 aaKnown RBP11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 VSIG8P0DPA2 414 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 SERPINA2P20848 420 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 RAB7AP51149 207 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 RBM11P57052 281 aaKnown RBP11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 RAB25P57735 213 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 DEFB136Q30KP8 78 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 DDI2Q5TDH0 399 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 OR2G6Q5TZ20 316 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 OR8H3Q8N146 312 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 OR51D1Q8NGF3 324 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 HAVCR2Q8TDQ0 301 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 CHPT1Q8WUD6 406 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 ING4Q9UNL4 249 aa11.97□□□□□ -0.49
PRKCSH-204ENST00000587290 IGHV1-3A0A0C4DH29 117 aa11.96□□□□□ -0.49
PRKCSH-204ENST00000587290 ZNF736B4DX44 427 aaPredicted RBP11.96□□□□□ -0.49
PRKCSH-204ENST00000587290 C15orf65H3BRN8 121 aa11.96□□□□□ -0.49
PRKCSH-204ENST00000587290 CCRL2O00421 344 aa11.96□□□□□ -0.49
PRKCSH-204ENST00000587290 SLC31A2O15432 143 aa11.96□□□□□ -0.49
PRKCSH-204ENST00000587290 MAGEB3O15480 346 aa11.96□□□□□ -0.49
PRKCSH-204ENST00000587290 IGHG2P01859 326 aa11.96□□□□□ -0.49
PRKCSH-204ENST00000587290 RPLP1P05386 114 aaKnown RBP11.96□□□□□ -0.49
PRKCSH-204ENST00000587290 ETV1P50549 477 aa11.96□□□□□ -0.49
PRKCSH-204ENST00000587290 CD69Q07108 199 aa11.96□□□□□ -0.49
PRKCSH-204ENST00000587290 RAB40BQ12829 278 aa11.96□□□□□ -0.49
PRKCSH-204ENST00000587290 ASCL4Q6XD76 172 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms