RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 ZNF19P17023 458 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 NFYBP25208 207 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 ZP1P60852 638 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 ADARB1P78563 741 aaKnown RBP11.9□□□□□ -0.5
VAPA-209ENST00000585042 MADCAM1Q13477 382 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 RBM39Q14498 530 aaKnown RBP11.9□□□□□ -0.5
VAPA-209ENST00000585042 C9orf152Q5JTZ5 239 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 LHFPL3Q86UP9 236 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 SYS1Q8N2H4 156 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 Q8NFD4 153 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 OR5D18Q8NGL1 313 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 OR10AC1Q8NH08 325 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 TOMM40LQ969M1 308 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 SPACA5Q96QH8 159 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 ALG8Q9BVK2 526 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 CHCHD3Q9NX63 227 aaKnown RBP11.9□□□□□ -0.5
VAPA-209ENST00000585042 WI2-2373I1.2A0A1W2PRP0 233 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 TMEM212A6NML5 194 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 NPIPB11E5RHQ5 1161 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 H0YJX3 145 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 SNRNP70P08621 437 aaKnown RBP11.89□□□□□ -0.51
VAPA-209ENST00000585042 HCKP08631 526 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 MYL12AP19105 171 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 DCKP27707 260 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 MYCNOSP40205 109 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 THBS3P49746 956 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 RPL23AP62750 156 aaKnown RBP11.89□□□□□ -0.51
VAPA-209ENST00000585042 IL13RA2Q14627 380 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 ATXN7L3Q14CW9 347 aaPredicted RBP11.89□□□□□ -0.51
VAPA-209ENST00000585042 KHDC1LQ5JSQ8 128 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 C10orf99Q6UWK7 81 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 TMPRSS11AQ6ZMR5 421 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 RNF144BQ7Z419 303 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 MRPL41Q8IXM3 137 aaKnown RBP11.89□□□□□ -0.51
VAPA-209ENST00000585042 OR52I1Q8NGK6 324 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 CNIH3Q8TBE1 160 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 APH1BQ8WW43 257 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 C4orf36Q96KX1 117 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 PPIL3Q9H2H8 161 aaKnown RBP11.89□□□□□ -0.51
VAPA-209ENST00000585042 FGF20Q9NP95 211 aaPredicted RBP11.89□□□□□ -0.51
VAPA-209ENST00000585042 CALYQ9NYX4 217 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 IDI2-AS1Q9NZ38 188 aa11.89□□□□□ -0.51
VAPA-209ENST00000585042 MEIKINA0A087WXM9 373 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 MAGEB3O15480 346 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 WBP4O75554 376 aaKnown RBP11.88□□□□□ -0.51
VAPA-209ENST00000585042 IL1AP01583 271 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 IGHG2P01859 326 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 GZMHP20718 246 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 GBX2P52951 348 aaPredicted RBP11.88□□□□□ -0.51
VAPA-209ENST00000585042 GP2P55259 537 aaKnown RBP11.88□□□□□ -0.51
VAPA-209ENST00000585042 SLC35B1P78383 322 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 EBI3Q14213 229 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 PAN3Q58A45 887 aaKnown RBP11.88□□□□□ -0.51
VAPA-209ENST00000585042 UNQ9370/PRO34162Q6UXP9 181 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 ASCL4Q6XD76 172 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 C5orf56Q8N8D9 126 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 KCTD12Q96CX2 325 aaKnown RBP11.88□□□□□ -0.51
VAPA-209ENST00000585042 B9D2Q9BPU9 175 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 ERVK13-1Q9NX77 482 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 NKX1-2Q9UD57 310 aaPredicted RBP11.88□□□□□ -0.51
VAPA-209ENST00000585042 KIF25Q9UIL4 384 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 PSG11Q9UQ72 335 aa11.88□□□□□ -0.51
VAPA-209ENST00000585042 NBEAL2Q6ZNJ1 2754 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 TRAV24A0A0B4J272 114 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 A0A1W2PPI3 338 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 EFCAB10A6NFE3 127 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 SH2D7A6NKC9 451 aaPredicted RBP11.87□□□□□ -0.51
VAPA-209ENST00000585042 CCDC159P0C7I6 412 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 TMEM11P17152 192 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 HES1Q14469 280 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 SMN1Q16637 294 aaKnown RBP11.87□□□□□ -0.51
VAPA-209ENST00000585042 ZNF529Q6P280 563 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 ETV3LQ6ZN32 361 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 OR2W3Q7Z3T1 314 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 ZNF329Q86UD4 541 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 DRAM1Q8N682 238 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 OR13A1Q8NGR1 328 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 OR56B4Q8NH76 319 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 OR5AK2Q8NH90 309 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 JAM3Q9BX67 310 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 GON7Q9BXV9 100 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 IFT22Q9H7X7 185 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 ING3Q9NXR8 418 aa11.87□□□□□ -0.51
VAPA-209ENST00000585042 EXOSC1Q9Y3B2 195 aaKnown RBP11.87□□□□□ -0.51
VAPA-209ENST00000585042 SERPINE3A8MV23 424 aa11.86□□□□□ -0.51
VAPA-209ENST00000585042 ZFPL1O95159 310 aa11.86□□□□□ -0.51
VAPA-209ENST00000585042 GAPDHP04406 335 aaKnown RBP11.86□□□□□ -0.51
VAPA-209ENST00000585042 RAB3AP20336 220 aa11.86□□□□□ -0.51
VAPA-209ENST00000585042 GLP1RP43220 463 aa11.86□□□□□ -0.51
VAPA-209ENST00000585042 CD69Q07108 199 aa11.86□□□□□ -0.51
VAPA-209ENST00000585042 ZNF816Q0VGE8 651 aaPredicted RBP11.86□□□□□ -0.51
VAPA-209ENST00000585042 UTF1Q5T230 341 aa11.86□□□□□ -0.51
VAPA-209ENST00000585042 RSBN1Q5VWQ0 802 aaPredicted RBP11.86□□□□□ -0.51
VAPA-209ENST00000585042 FOXRED2Q8IWF2 684 aa11.86□□□□□ -0.51
VAPA-209ENST00000585042 C8orf31Q8N9H6 132 aa11.86□□□□□ -0.51
VAPA-209ENST00000585042 OR52M1Q8NGK5 317 aa11.86□□□□□ -0.51
VAPA-209ENST00000585042 TFAP2CQ92754 450 aa11.86□□□□□ -0.51
VAPA-209ENST00000585042 TMEM80Q96HE8 168 aa11.86□□□□□ -0.51
VAPA-209ENST00000585042 NR1H4Q96RI1 486 aaPredicted RBP11.86□□□□□ -0.51
VAPA-209ENST00000585042 P2RX4Q99571 388 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms