RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 KLK2P20151 261 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ETV6P41212 452 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CRATP43155 626 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CSNK1A1P48729 337 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 SRP9P49458 86 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 LHX2P50458 406 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ARPC4P59998 168 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 PSME3P61289 254 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 RPL8P62917 257 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF154Q13106 437 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TSC22D1Q15714 1073 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 MSMO1Q15800 293 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 MRPL23Q16540 153 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM155Q4W5P6 130 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 LY6G6FQ5SQ64 297 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 GPR157Q5UAW9 335 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 DRAM2Q6UX65 266 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 BHLHA15Q7RTS1 189 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 SSX6Q7RTT6 188 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 AAED1Q7RTV5 226 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CCDC71Q8IV32 467 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 C20orf196Q8IYI0 205 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CMTM1Q8IZ96 169 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 C4orf33Q8N1A6 199 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OR4Q3Q8NH05 313 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 PLPPR1Q8TBJ4 325 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OR51E1Q8TCB6 317 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CD300LFQ8TDQ1 290 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 LRRC29Q8WV35 223 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 C10orf82Q8WW14 230 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TMBIM1Q969X1 311 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC25A44Q96H78 314 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 MICU1Q9BPX6 476 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 NIPSNAP3BQ9BS92 247 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 HCAR1Q9BXC0 346 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CDCA4Q9BXL8 241 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM165Q9HC07 324 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OPN4Q9UHM6 478 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CSDC2Q9Y534 153 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 MPC1Q9Y5U8 109 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 USP9YO00507 2555 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 LRBAP50851 2863 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CNOT1A5YKK6 2376 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 EFCAB9A8MZ26 197 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 NBR2O15453 112 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CXCL13O43927 109 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF780AO75290 641 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 UPK3AO75631 287 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 GATBO75879 557 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SULT1C4O75897 302 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CD14P08571 375 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 LINC00032P0C843 101 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PET100P0DJ07 73 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PIPP12273 146 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PRKACBP22694 351 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PSMB5P28074 263 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC6A1P30531 599 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 APLNRP35414 380 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 GLRXP35754 106 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 RPS5P46782 204 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CLDN18P56856 261 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 LINC01547P58512 204 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 H3F3AP84243 136 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PMS2P3Q13401 168 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CCDC58Q4VC31 144 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PAN3Q58A45 887 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SOHLH1Q5JUK2 328 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 FAM27BQ5VT28 67 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 UBE2UQ5VVX9 321 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 C1orf94Q6P1W5 598 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 C12orf54Q6X4T0 127 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ACOT7LQ6ZUV0 252 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 STX19Q8N4C7 294 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SPICQ8N5J4 248 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 DRAXINQ8NBI3 349 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 OR9Q1Q8NGQ5 310 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 TEX47Q8TBZ9 253 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CAPSLQ8WWF8 208 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CDS1Q92903 461 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 TOMM40LQ969M1 308 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 AURKBQ96GD4 344 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PGLYRP4Q96LB8 373 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 HIST1H4GQ99525 98 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 MCHR1Q99705 422 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 EBF4Q9BQW3 602 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 DSN1Q9H410 356 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CBLN4Q9NTU7 201 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 IMPAD1Q9NX62 359 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 GAB2Q9UQC2 676 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PIKFYVEQ9Y2I7 2098 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 HERC2O95714 4834 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 MED13Q9UHV7 2174 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SHANK1Q9Y566 2161 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PI4KAP42356 2102 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PTPRQQ9UMZ3 2332 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 RBMY1BA6NDE4 496 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 RBMY1EA6NEQ0 496 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 OR5H1A6NKK0 313 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF99A8MXY4 864 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 F6UB75 175 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms