RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 ZNF221Q9UK13 617 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 VSIG4Q9Y279 399 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 MAB21L2Q9Y586 359 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 IGHV1-69-2A0A0G2JMI3 117 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 HMX3A6NHT5 357 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 K7N7A8 449 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 FSTL3O95633 263 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 DIRAS3O95661 229 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 SOD3P08294 240 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 CTXN2P0C2S0 81 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 RCC1P18754 421 aaPredicted RBP11.69□□□□□ -0.54
UBBP4-202ENST00000584755 ANXA7P20073 488 aaKnown RBP11.69□□□□□ -0.54
UBBP4-202ENST00000584755 ECI1P42126 302 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 TSPAN5P62079 268 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 HLA-DRB3P79483 266 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 HERPUD1Q15011 391 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 SURF2Q15527 256 aaPredicted RBP11.69□□□□□ -0.54
UBBP4-202ENST00000584755 METTL11BQ5VVY1 283 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 ZNF788Q6ZQV5 615 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 ZNF561Q8N587 486 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 OR4A4PQ8NGN8 299 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 OR6F1Q8NGZ6 308 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 PPP1R35Q8TAP8 253 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 PPP1R14BQ96C90 147 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 CABLES2Q9BTV7 478 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 DNTTIP1Q9H147 329 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 LIME1Q9H400 295 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 NCOR1P1Q9H4R4 102 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 GPR132Q9UNW8 380 aa11.69□□□□□ -0.54
UBBP4-202ENST00000584755 CHD6Q8TD26 2715 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 TRAV38-1A0A0B4J264 116 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 IGKV1-6A0A0C4DH72 117 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 OR5H14A6NHG9 310 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 SNRPGP15A8MWD9 76 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 NPIPB11E5RHQ5 1161 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 TNFRSF13BO14836 293 aaPredicted RBP11.68□□□□□ -0.54
UBBP4-202ENST00000584755 MGST3O14880 152 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 SCTP09683 121 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 VSIG10L2P0DP72 767 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 FPR2P25090 351 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 GABRA2P47869 451 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 HMGN3Q15651 99 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 CARTPTQ16568 116 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 IGSF11Q5DX21 431 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 ZNF554Q86TJ5 538 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 ASCC1Q8N9N2 400 aaKnown RBP11.68□□□□□ -0.54
UBBP4-202ENST00000584755 SCGB3A2Q96PL1 93 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 GAFA1Q96PS6 74 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 ZNF2Q9BSG1 426 aaPredicted RBP11.68□□□□□ -0.54
UBBP4-202ENST00000584755 FAM234AQ9H0X4 552 aa11.68□□□□□ -0.54
UBBP4-202ENST00000584755 DSCAMO60469 2012 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 PPIAL4EA0A075B759 164 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 PPIAL4DF5H284 164 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 TK1P04183 234 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 RLN1P04808 185 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 PPIAL4FP0DN26 164 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 RRAS2P62070 204 aaPredicted RBP11.67□□□□□ -0.54
UBBP4-202ENST00000584755 MRPS11P82912 194 aaKnown RBP11.67□□□□□ -0.54
UBBP4-202ENST00000584755 AESQ08117 197 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 FAHD2BQ6P2I3 314 aaPredicted RBP11.67□□□□□ -0.54
UBBP4-202ENST00000584755 SLC25A42Q86VD7 318 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 OR5D13Q8NGL4 314 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 MARCH1Q8TCQ1 289 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 CCDC107Q8WV48 283 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 CCL17Q92583 94 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 FAHD2AQ96GK7 314 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 VRK1Q99986 396 aaPredicted RBP11.67□□□□□ -0.54
UBBP4-202ENST00000584755 RAB1BQ9H0U4 201 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 OR51J1Q9H342 316 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 ZNF665Q9H7R5 613 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 KIF25Q9UIL4 384 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 TRAPPC2LQ9UL33 140 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 PCDHB10Q9UN67 800 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 PPIAL4AQ9Y536 164 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 FAM208BQ5VWN6 2430 aa11.67□□□□□ -0.54
UBBP4-202ENST00000584755 TRBV6-7A0A0A0MS04 114 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 CLEC18AA5D8T8 446 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 SIGLEC5O15389 551 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 TUSC2O75896 110 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 ZNF205O95201 554 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 ERP29P30040 261 aaKnown RBP11.66□□□□□ -0.54
UBBP4-202ENST00000584755 GLP1RP43220 463 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 NPY4RP50391 375 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 UBE2MP61081 183 aaKnown RBP11.66□□□□□ -0.54
UBBP4-202ENST00000584755 CR1LQ2VPA4 569 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 KRBOX4Q5JUW0 171 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 CLEC18BQ6UXF7 455 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 C5orf24Q7Z6I8 188 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 CLEC18CQ8NCF0 446 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 TMEM185AQ8NFB2 350 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 NEU4Q8WWR8 484 aaPredicted RBP11.66□□□□□ -0.54
UBBP4-202ENST00000584755 MOB3AQ96BX8 217 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 BEX2Q9BXY8 128 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 C5orf66Q9H5L9 145 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 BEX1Q9HBH7 125 aa11.66□□□□□ -0.54
UBBP4-202ENST00000584755 GPN1Q9HCN4 374 aaPredicted RBP11.66□□□□□ -0.54
UBBP4-202ENST00000584755 RP2O75695 350 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 GYPAP02724 150 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 OR4E1P0C645 316 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 FCGR2CP31995 323 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms