RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CDC42EP3Q9UKI2 254 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 TTC3P53804 2025 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 OR1B1Q8NGR6 318 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 FBLIM1Q8WUP2 373 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 NAGKQ9UJ70 344 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 CES1P1Q9UKY3 287 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 GZMHP20718 246 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 CTGFP29279 349 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 PMELP40967 661 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 EFNB2P52799 333 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 RPL30P62888 115 aaKnown RBP11.47□□□□□ -0.57
RNF43-208ENST00000584437 SKP2Q13309 424 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 OR4B1Q8NGF8 309 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 COL25A1Q9BXS0 654 aaPredicted RBP11.47□□□□□ -0.57
RNF43-208ENST00000584437 CHST5Q9GZS9 411 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 SLC26A1Q9H2B4 701 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 P4HTMQ9NXG6 502 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 HSF4Q9ULV5 492 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 TRAV17A0A0B4J275 112 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 RHBDL1O75783 438 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 GOSR1O95249 250 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 POU2F2P09086 479 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 HOXB3P14651 431 aaPredicted RBP11.46□□□□□ -0.57
RNF43-208ENST00000584437 MEOX1P50221 254 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 KLK13Q9UKR3 277 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 K7ESF4 209 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.57
RNF43-208ENST00000584437 CRYABP02511 175 aaKnown RBP11.46□□□□□ -0.57
RNF43-208ENST00000584437 TMIGD3P0DMS9 266 aaPredicted RBP11.46□□□□□ -0.57
RNF43-208ENST00000584437 FSTP19883 344 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 DCAF12L2Q5VW00 463 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 CYB561D1Q8N8Q1 229 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 CADM4Q8NFZ8 388 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 RPL36A-HNRNPH2H7BZ11 118 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 TNFSF15O95150 251 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 ACP1P24666 158 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 CEACAM3P40198 252 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 IFITM2Q01629 132 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 ZFP30Q9Y2G7 519 aa11.46□□□□□ -0.57
RNF43-208ENST00000584437 RCC1P18754 421 aaPredicted RBP11.46□□□□□ -0.58
RNF43-208ENST00000584437 FCARP24071 287 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 SMAD4Q13485 552 aaKnown RBP11.46□□□□□ -0.58
RNF43-208ENST00000584437 OR2M3Q8NG83 312 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 SGMS2Q8NHU3 365 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 MRGPRFQ96AM1 343 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 TM4SF19Q96DZ7 209 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 TMEM38BQ9NVV0 291 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 TOGARAM1Q9Y4F4 1720 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 IGHV1OR21-1A0A087WYE8 117 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 BGLAPP02818 100 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 GAMTQ14353 236 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 ACER2Q5QJU3 275 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 TEPPQ6URK8 271 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 SSMEM1Q8WWF3 244 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 ABHD14BQ96IU4 210 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 AP5S1Q9NUS5 200 aa11.46□□□□□ -0.58
RNF43-208ENST00000584437 CXorf65A6NEN9 183 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 J3QT63 122 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 PTP4A3O75365 173 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 HBZP02008 142 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 SERGEFQ9UGK8 458 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 MKRN2OSH3BPM6 223 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 HLA-DQB1P01920 261 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 G6PCP35575 357 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 KLF3P57682 345 aaPredicted RBP11.45□□□□□ -0.58
RNF43-208ENST00000584437 ZNF385CQ66K41 422 aaPredicted RBP11.45□□□□□ -0.58
RNF43-208ENST00000584437 ZNF519Q8TB69 540 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 FBXO17Q96EF6 278 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 TUBD1Q9UJT1 453 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 ARID1AO14497 2285 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 DDTP30046 118 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 SRSF9Q13242 221 aaKnown RBP eCLIP11.45□□□□□ -0.582e-10■□□□□ 10.8
RNF43-208ENST00000584437 IL19Q9UHD0 177 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 TNFAIP6P98066 277 aaPredicted RBP11.45□□□□□ -0.58
RNF43-208ENST00000584437 PMCHL1Q16048 86 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 GPA33Q99795 319 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 FOXQ1Q9C009 403 aa11.45□□□□□ -0.58
RNF43-208ENST00000584437 LNP1A1A4G5 178 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 WISP3O95389 354 aaPredicted RBP11.44□□□□□ -0.58
RNF43-208ENST00000584437 C1QL3Q5VWW1 255 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 C10orf113Q5VZT2 155 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 OR2D3Q8NGH3 330 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 SMIM12Q96EX1 92 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 RALYQ9UKM9 306 aaKnown RBP11.44□□□□□ -0.58
RNF43-208ENST00000584437 UFC1Q9Y3C8 167 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 A0A1W2PPC1 479 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 MPTX1A8MV57 137 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 CD160O95971 181 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 LILRA6Q6PI73 481 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 OR1P1Q8NH06 330 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 ONECUT1Q9UBC0 465 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 DMRT1Q9Y5R6 373 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 AHDC1Q5TGY3 1603 aaPredicted RBP11.44□□□□□ -0.58
RNF43-208ENST00000584437 TRGC2P03986 189 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 HFEQ30201 348 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 CD200R1LQ6Q8B3 271 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 LRRC75AQ8NAA5 344 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 OR5A2Q8NGI9 324 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 P2RX4Q99571 388 aa11.44□□□□□ -0.58
RNF43-208ENST00000584437 SIRT4Q9Y6E7 314 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms