RNA–Protein interactions for RNA: ENST00000584261.5

DDX42-218, Transcript of DEAD-box helicase 42, human

TSL 3

Gene DDX42, Length 510 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-218	ENST00000584261	SLC33A1	O00400	549 aa	Predicted RBP	4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	MRPS14	O60783	128 aa	Known RBP	4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	ZNF728	P0DKX0	622 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	GTF2F2	P13984	249 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	CCL3L1	P16619	93 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	CPE	P16870	476 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	SRM	P19623	302 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	SERPINA2	P20848	420 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	PSMA1	P25786	263 aa	Known RBP	4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	ERP29	P30040	261 aa	Known RBP	4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	OR3A1	P47881	315 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	UBE2E1	P51965	193 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	DLX1	P56177	255 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	GABARAPL2	P60520	117 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	RPS25	P62851	125 aa	Known RBP	4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	MEF2C	Q06413	473 aa	Predicted RBP	4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	KLRD1	Q13241	179 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	GPR176	Q14439	515 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	ZNF273	Q14593	569 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	IL13RA2	Q14627	380 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	TBCE	Q15813	527 aa	Predicted RBP	4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	DEFB112	Q30KQ8	113 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	PIGY	Q3MUY2	71 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	HSD17B12	Q53GQ0	312 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	FAM27D1	Q5T7N8	215 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	GLT8D1	Q68CQ7	371 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261		Q6P435	159 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	METAP1D	Q6UB28	335 aa	Predicted RBP	4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	GLIPR1L1	Q6UWM5	242 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	TRAPPC6B	Q86SZ2	158 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	CDH26	Q8IXH8	852 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	PHC2	Q8IXK0	858 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	OSR2	Q8N2R0	312 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	TPRX1	Q8N7U7	411 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	NKAIN3	Q8N8D7	197 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	ZDHHC22	Q8N966	263 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261		Q8NFD4	153 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	OR51T1	Q8NGJ9	327 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	ZFAND2B	Q8WV99	257 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	PHYHIP	Q92561	330 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	TNFRSF14	Q92956	283 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	MUL1	Q969V5	352 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	ZNF48	Q96MX3	618 aa	Predicted RBP	4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	C19orf24	Q9BVV8	132 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	SLITRK2	Q9H156	845 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	PPA2	Q9H2U2	334 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	ACOT13	Q9NPJ3	140 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	ESM1	Q9NQ30	184 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	ING3	Q9NXR8	418 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	IL36G	Q9NZH8	169 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	ST3GAL6	Q9Y274	331 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	LRRC42	Q9Y546	428 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	LINC00312	Q9Y6C7	94 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	ATR	Q13535	2644 aa		4.99	□□□□□ -1.61
DDX42-218	ENST00000584261	TRGV10	A0A0A0MS01	117 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	TRAV24	A0A0B4J272	114 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261		A0A0U1RQK1	487 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	MDFIC2	A0A1B0GVS7	189 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	DNAJC9-AS1	A6NH13	148 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	C17orf98	A8MV24	154 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	HSPB6	O14558	160 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	NPFF	O15130	113 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	RRP9	O43818	475 aa	Known RBP	4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	SC5D	O75845	299 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	OR7C1	O76099	320 aa	Predicted RBP	4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	PAH	P00439	452 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	CSN2	P05814	226 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	UCHL1	P09936	223 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	COX7A1	P24310	79 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	GABRA5	P31644	462 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	GLIPR1	P48060	266 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	DLX6	P56179	175 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	P2RX3	P56373	397 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	RBM11	P57052	281 aa	Known RBP	4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	KRTAP10-7	P60409	375 aa	Predicted RBP	4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	UBA52	P62987	128 aa	Known RBP	4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	ACTG1	P63261	375 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	EMX1	Q04741	257 aa	Predicted RBP	4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	AES	Q08117	197 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	SLC9A3R2	Q15599	337 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	PAN3	Q58A45	887 aa	Known RBP	4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	NHLRC3	Q5JS37	347 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	KRBOX4	Q5JUW0	171 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	ATAD3C	Q5T2N8	411 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	AWAT2	Q6E213	333 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	TMEM91	Q6ZNR0	172 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	LINC00596	Q86U02	117 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	SPART	Q8N0X7	666 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	PNKD	Q8N490	385 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	C11orf42	Q8N5U0	333 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	SPATA3	Q8NHX4	192 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	FAM216A	Q8WUB2	273 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	FCGR1B	Q92637	280 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	GCDH	Q92947	438 aa	Predicted RBP	4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	SLC25A28	Q96A46	364 aa		4.98	□□□□□ -1.61
DDX42-218	ENST00000584261	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms